Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-99P-201ENST00000364721 107 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 XGY1-201ENST00000381172 446 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 MIR32-201ENST00000384965 70 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-1156P-201ENST00000410365 100 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 AL354751.2-201ENST00000415471 210 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 RPL23AP70-201ENST00000483361 460 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 RN7SL283P-201ENST00000489055 303 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 AC091144.1-201ENST00000519573 138 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 AC144568.1-201ENST00000520139 137 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 MIR7106-201ENST00000612419 65 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 uc_338.22-201ENST00000622722 187 ntBASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC144BQ3MJ40 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 RNA5SP240-201ENST00000365355 128 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-17P-201ENST00000384245 107 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 RNU6-18P-201ENST00000384527 107 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 MIR190B-201ENST00000401119 79 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 MIR548P-201ENST00000408336 84 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC092423.1-201ENST00000430165 186 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AL137792.2-201ENST00000443484 235 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 CKS1BP2-201ENST00000497342 240 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 RN7SKP282-201ENST00000516824 299 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 MIR3117-201ENST00000584034 78 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC010928.2-201ENST00000588017 287 ntBASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC144BQ3MJ40 AC008264.2-201ENST00000610193 3731 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 snoU2_19.1-201ENST00000362361 80 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 RNU1-115P-201ENST00000365329 160 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 MIR208B-201ENST00000401172 77 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 HMGB3P2-201ENST00000411913 584 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 RPL32P35-201ENST00000415214 394 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AC018865.2-201ENST00000423631 129 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 Z82188.1-201ENST00000436709 154 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AL035666.1-201ENST00000446195 348 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AL353752.1-201ENST00000454946 260 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 Y_RNA.661-201ENST00000516003 99 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 RNA5SP54-201ENST00000516951 92 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC144BQ3MJ40 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 Y_RNA.5-201ENST00000362334 102 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RNU4-15P-201ENST00000362613 141 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 SNORA5B-201ENST00000363786 132 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 U3.9-201ENST00000363823 204 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 SET-203ENST00000372688 801 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 Y_RNA.394-201ENST00000383942 103 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 MIR320B2-201ENST00000408479 138 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RNA5SP201-201ENST00000410316 124 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RNU2-63P-201ENST00000410792 194 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AC090096.1-201ENST00000489168 390 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AC145146.1-201ENST00000496370 254 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 RNU6-586P-201ENST00000517265 104 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AL356055.1-201ENST00000602528 446 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 PCGEM1.1-201ENST00000613431 131 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AL138825.1-201ENST00000618587 192 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 AC090517.3-201ENST00000625170 141 ntBASIC3.57□□□□□ -1.84
CCDC144BQ3MJ40 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 Y_RNA.138-201ENST00000363462 102 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 RNU5F-3P-201ENST00000363767 117 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 RNU6-1180P-201ENST00000364935 107 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 Y_RNA.314-201ENST00000365114 102 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 SNORA54-201ENST00000384281 123 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 RNU6-541P-201ENST00000384709 110 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 RNU6-1093P-201ENST00000391194 107 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 AC092427.1-202ENST00000430569 476 ntBASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC144BQ3MJ40 AL445687.1-201ENST00000439946 251 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms