Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 RNA5SP102-201ENST00000516865 106 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.65□□□□□ -2.15
SF3A2Q15428 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AF250324.2-201ENST00000608299 610 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC007684.1-201ENST00000609671 477 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC011155.2-201ENST00000623202 216 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC124864.2-201ENST00000624736 186 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC068137.3-201ENST00000639191 341 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC073869.6-201ENST00000640656 341 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 MTND5P35-201ENST00000557537 1720 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 Y_RNA.112-201ENST00000363250 102 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 SNORA7.1-201ENST00000363750 139 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-1303P-201ENST00000364841 107 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-546P-201ENST00000383991 107 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-1103P-201ENST00000384150 107 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-74P-201ENST00000384235 107 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU6-456P-201ENST00000384493 107 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SF3A2Q15428 SNORA40.19-201ENST00000390846 128 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AL356432.1-201ENST00000405809 419 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 MIR1283-2-201ENST00000408621 87 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNU4-55P-201ENST00000410731 137 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.64□□□□□ -2.15
SF3A2Q15428 AC074117.2-201ENST00000417130 397 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.64□□□□□ -2.15
SF3A2Q15428 AC073464.1-201ENST00000429823 534 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 C8orf59P1-201ENST00000429930 303 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AL365400.1-201ENST00000431854 640 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 GPR143P-201ENST00000434155 205 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AC002486.1-201ENST00000435098 391 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 MTND1P4-201ENST00000435196 415 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.64□□□□□ -2.15
SF3A2Q15428 HMGB1P29-201ENST00000505659 499 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 ATP5EP1-201ENST00000510257 156 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 RNA5SP220-201ENST00000516298 104 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AP003072.2-201ENST00000527756 676 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.64□□□□□ -2.15
SF3A2Q15428 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.64□□□□□ -2.15
SF3A2Q15428 BNIP3P6-201ENST00000549284 499 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 SUB1P2-201ENST00000556401 297 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.64□□□□□ -2.15
SF3A2Q15428 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
SF3A2Q15428 AL078605.1-201ENST00000603529 500 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AL391646.1-201ENST00000603860 190 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 AC073534.2-201ENST00000620377 381 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 SEPT14P19-203ENST00000633205 211 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 MIR6863-201ENST00000636112 90 ntBASIC1.64□□□□□ -2.15
SF3A2Q15428 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.64□□□□□ -2.15
SF3A2Q15428 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SF3A2Q15428 Y_RNA.1-201ENST00000352915 104 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 SNORD56.1-201ENST00000362913 68 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU6-1097P-201ENST00000363586 107 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 Y_RNA.159-201ENST00000363674 87 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU6-108P-201ENST00000365558 107 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU2-9P-201ENST00000410194 145 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 POLHP1-201ENST00000411806 470 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 FCF1P9-201ENST00000412546 282 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AC244636.1-201ENST00000421152 228 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 BX510359.4-201ENST00000423750 193 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 MTCO2P19-201ENST00000427513 598 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 USP9YP28-201ENST00000435142 589 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
SF3A2Q15428 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 PRELID3BP1-201ENST00000457142 540 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU1-123P-201ENST00000458950 160 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RPL30P12-201ENST00000474666 353 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU6-314P-201ENST00000516574 104 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU6-965P-201ENST00000516721 96 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 RNU6-410P-201ENST00000517006 107 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 MTND1P5-201ENST00000517906 940 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.63□□□□□ -2.15
SF3A2Q15428 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.63□□□□□ -2.15
SF3A2Q15428 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 TPRKBP2-201ENST00000565969 475 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AC107304.1-201ENST00000604229 296 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AL359314.1-201ENST00000616913 261 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AL132822.1-201ENST00000617063 513 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 AC097372.5-201ENST00000623665 376 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 U6.114-201ENST00000636407 96 ntBASIC1.63□□□□□ -2.15
SF3A2Q15428 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SF3A2Q15428 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SF3A2Q15428 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SF3A2Q15428 snoU2_19.1-201ENST00000362361 80 ntBASIC1.62□□□□□ -2.15
SF3A2Q15428 RNU6-1287P-201ENST00000362914 107 ntBASIC1.62□□□□□ -2.15
SF3A2Q15428 RNY1-201ENST00000364228 113 ntBASIC1.62□□□□□ -2.15
SF3A2Q15428 Y_RNA.409-201ENST00000383990 98 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms