Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.28□□□□□ -1.88
SF3B3Q15393 AC093852.1-201ENST00000503587 266 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 AC114801.2-201ENST00000503825 781 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 MRPS35P2-201ENST00000508242 191 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RNU6-612P-201ENST00000516909 102 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RNU7-4P-201ENST00000516961 62 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 MIR3124-201ENST00000582636 67 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 FTX_3.1-201ENST00000610451 147 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SF3B3Q15393 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.28□□□□□ -1.88
SF3B3Q15393 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.27□□□□□ -1.89
SF3B3Q15393 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SF3B3Q15393 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 ZNF72P-201ENST00000425869 1908 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
SF3B3Q15393 SNORD50.1-201ENST00000362987 71 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 RNU6-238P-201ENST00000363313 106 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 RNY3P11-201ENST00000364153 102 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 SNORD14.1-201ENST00000365609 90 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 MIR1252-201ENST00000408861 65 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 RN7SKP123-201ENST00000410732 291 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 BMS1P22-201ENST00000414726 313 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AL512844.2-201ENST00000433990 593 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC108059.2-201ENST00000434626 151 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 snoU109.2-201ENST00000459316 135 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 RPS29P27-201ENST00000463711 170 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AK3P2-201ENST00000507976 429 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.27□□□□□ -1.89
SF3B3Q15393 RNU6-377P-201ENST00000515965 102 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B3Q15393 AP000867.2-201ENST00000532468 320 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B3Q15393 AC004584.2-201ENST00000570407 410 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC020895.1-201ENST00000595362 272 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC124312.5-201ENST00000604451 268 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC009318.2-201ENST00000610917 651 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 AC007792.1-201ENST00000623023 402 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B3Q15393 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.27□□□□□ -1.89
SF3B3Q15393 MTND5P9-201ENST00000503854 1755 ntBASIC3.27□□□□□ -1.89
SF3B3Q15393 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SF3B3Q15393 AC099654.7-201ENST00000635788 2127 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B3Q15393 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B3Q15393 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SF3B3Q15393 RNU6-78P-201ENST00000362897 107 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 RNU6-336P-201ENST00000364891 107 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 RNU5E-7P-201ENST00000365290 117 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 MIR625-201ENST00000385047 85 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SF3B3Q15393 MIR887-201ENST00000401258 79 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 Y_RNA.618-201ENST00000410949 107 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 MTND3P9-201ENST00000429526 346 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B3Q15393 UBBP3-201ENST00000445497 241 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 AC079354.2-201ENST00000453523 154 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.26□□□□□ -1.89
SF3B3Q15393 RPL22P13-201ENST00000493291 347 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.26□□□□□ -1.89
SF3B3Q15393 RAC1P5-201ENST00000512182 576 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 AC131281.1-201ENST00000522984 164 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.26□□□□□ -1.89
SF3B3Q15393 MIR4782-201ENST00000577987 79 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 SCARNA4-202ENST00000625402 129 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 CTSLP2-204ENST00000629029 392 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 U6.99-201ENST00000637524 83 ntBASIC3.26□□□□□ -1.89
SF3B3Q15393 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B3Q15393 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SF3B3Q15393 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SF3B3Q15393 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B3Q15393 RNU6-778P-201ENST00000363269 103 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 Y_RNA.152-201ENST00000363578 100 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 RPL21P75-201ENST00000396599 483 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 RPL21P28-201ENST00000401418 483 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.25□□□□□ -1.89
SF3B3Q15393 CBX3P6-201ENST00000430257 527 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B3Q15393 MTATP6P7-201ENST00000453315 681 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 RPL21P39-201ENST00000463605 483 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC087190.1-201ENST00000484462 480 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC093591.1-201ENST00000491435 481 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 RPL21P16-201ENST00000495531 483 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B3Q15393 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.25□□□□□ -1.89
SF3B3Q15393 RNU6-1183P-201ENST00000517054 60 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 Y_RNA.715-201ENST00000517082 110 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC040926.1-201ENST00000530195 238 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.25□□□□□ -1.89
SF3B3Q15393 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC006600.1-201ENST00000572529 153 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 VN1R91P-201ENST00000594377 169 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AL355598.1-201ENST00000604169 202 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 MIR1244-1-201ENST00000612829 85 ntBASIC3.25□□□□□ -1.89
SF3B3Q15393 AC107871.2-201ENST00000612894 502 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms