Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
FOXF1Q12946 RNU6-434P-201ENST00000384376 107 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 SNORA40.3-201ENST00000390964 122 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 RNA5SP100-201ENST00000410903 110 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 RNA5SP59-201ENST00000410922 110 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXF1Q12946 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
FOXF1Q12946 AL117339.3-201ENST00000418733 162 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.98□□□□□ -2.25
FOXF1Q12946 PIGFP2-201ENST00000421400 651 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 RPL23AP95-201ENST00000426806 265 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.98□□□□□ -2.25
FOXF1Q12946 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.98□□□□□ -2.25
FOXF1Q12946 FTH1P25-201ENST00000447665 469 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXF1Q12946 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXF1Q12946 MTND3P5-201ENST00000512798 333 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 MTCO3P28-201ENST00000513351 515 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 RNU6-965P-201ENST00000516721 96 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 RNA5SP503-201ENST00000517047 117 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AP001893.2-201ENST00000526949 202 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AL356057.1-201ENST00000533798 831 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXF1Q12946 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.98□□□□□ -2.25
FOXF1Q12946 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXF1Q12946 MIR4703-201ENST00000577728 79 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 MIR3915-201ENST00000578518 97 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.98□□□□□ -2.25
FOXF1Q12946 RPL17P51-201ENST00000605218 238 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 AC109347.2-201ENST00000610220 349 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
FOXF1Q12946 MIR8074-201ENST00000615081 81 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.98□□□□□ -2.25
FOXF1Q12946 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.98□□□□□ -2.25
FOXF1Q12946 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
FOXF1Q12946 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
FOXF1Q12946 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
FOXF1Q12946 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC092268.1-201ENST00000342691 405 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 Y_RNA.67-201ENST00000362870 100 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-23P-201ENST00000363283 107 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNA5SP493-201ENST00000364115 91 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 SNORD32A-201ENST00000364805 84 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-336P-201ENST00000364891 107 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-1029P-201ENST00000384109 107 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-297P-201ENST00000384636 107 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNA5SP201-201ENST00000410316 124 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 NCOR1P3-201ENST00000420479 303 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.97□□□□□ -2.25
FOXF1Q12946 ISCA1P6-201ENST00000427740 390 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC133104.1-201ENST00000429100 218 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AL133396.1-201ENST00000432048 687 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 SNAP23P1-201ENST00000433229 246 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AL022238.1-201ENST00000442557 355 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.97□□□□□ -2.25
FOXF1Q12946 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 MTCO3P7-201ENST00000510008 774 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AC025465.3-201ENST00000510570 311 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC005741.1-201ENST00000511094 432 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU2-69P-201ENST00000516061 100 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-1178P-201ENST00000516674 107 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 RNU6-759P-201ENST00000516740 103 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 SNORA25.17-201ENST00000517184 124 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.97□□□□□ -2.25
FOXF1Q12946 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.97□□□□□ -2.25
FOXF1Q12946 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.97□□□□□ -2.25
FOXF1Q12946 MIR4760-201ENST00000585040 80 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC091805.2-201ENST00000603848 235 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC009161.2-201ENST00000624626 138 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXF1Q12946 SNORD98-201ENST00000636377 67 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
FOXF1Q12946 LINC02555-201ENST00000563933 1951 ntBASIC0.97□□□□□ -2.25
FOXF1Q12946 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.97□□□□□ -2.25
FOXF1Q12946 MTND5P9-201ENST00000503854 1755 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-37P-201ENST00000362692 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-11P-201ENST00000364234 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-25P-201ENST00000383873 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-1-201ENST00000383898 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-26P-201ENST00000383985 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-48P-201ENST00000384161 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-36P-201ENST00000384172 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-4P-201ENST00000384205 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-5P-201ENST00000384238 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-43P-201ENST00000384302 107 ntBASIC0.96□□□□□ -2.26
FOXF1Q12946 RNU6-3P-201ENST00000384314 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms