Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
CSTF1Q05048 AC022616.8-201ENST00000533569 253 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
CSTF1Q05048 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.81□□□□□ -2.12
CSTF1Q05048 AC008752.3-201ENST00000588113 712 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AC091805.2-201ENST00000603848 235 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AL136363.2-201ENST00000604173 851 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.81□□□□□ -2.12
CSTF1Q05048 AL354685.2-201ENST00000448218 1447 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.8□□□□□ -2.12
CSTF1Q05048 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AL391987.6-201ENST00000305671 199 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 RNU6-692P-201ENST00000384496 107 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 Y_RNA.517-201ENST00000384551 106 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 RNU11-3P-201ENST00000391111 133 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 MIR1262-201ENST00000408276 93 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 RNU2-16P-201ENST00000410712 136 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.8□□□□□ -2.12
CSTF1Q05048 MTCO1P21-201ENST00000416634 589 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 MTCYBP8-201ENST00000422855 651 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 BX510359.4-201ENST00000423750 193 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.8□□□□□ -2.12
CSTF1Q05048 MTCO2P7-201ENST00000446518 666 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 SNRPFP3-201ENST00000457792 225 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 snoU13.14-201ENST00000459372 104 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AC010493.1-201ENST00000513479 292 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 MIR449C-201ENST00000516047 92 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 RNU2-69P-201ENST00000516061 100 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AC023050.3-201ENST00000541142 333 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.8□□□□□ -2.12
CSTF1Q05048 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC073648.5-201ENST00000603502 305 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC068792.1-201ENST00000621354 417 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC022418.1-201ENST00000624118 445 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 AC139792.2-201ENST00000624218 587 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 MTND5P26-201ENST00000426018 1752 ntBASIC1.8□□□□□ -2.12
CSTF1Q05048 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CSTF1Q05048 AC009487.4-201ENST00000624969 3585 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 RNU6-1127P-201ENST00000384580 107 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 RNU6-1222P-201ENST00000384615 107 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 MIR29C-201ENST00000385231 88 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 SNORA16.2-201ENST00000390991 127 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 SNORA12-201ENST00000391162 147 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AL663109.1-201ENST00000411498 844 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 SNORD56-201ENST00000413522 71 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.79□□□□□ -2.12
CSTF1Q05048 MTATP6P18-201ENST00000417994 673 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSTF1Q05048 MTCO2P19-201ENST00000427513 598 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AC132479.1-201ENST00000449160 144 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AK3P2-201ENST00000507976 429 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 PTP4A1P4-201ENST00000512479 322 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 LRRC34P2-201ENST00000514850 553 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 RNU5F-2P-201ENST00000516066 82 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 RNU2-44P-201ENST00000516795 194 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 MTCO2P4-201ENST00000517968 247 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AP005639.2-201ENST00000527592 928 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.79□□□□□ -2.12
CSTF1Q05048 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.79□□□□□ -2.12
CSTF1Q05048 MIR5583-1-201ENST00000580941 59 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 MTATP6P3-201ENST00000581686 676 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 SNORA4-201ENST00000584302 138 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AC092954.2-201ENST00000609103 430 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 uc_338.11-201ENST00000619132 160 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 AL159153.1-201ENST00000619688 317 ntBASIC1.79□□□□□ -2.12
CSTF1Q05048 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
CSTF1Q05048 Y_RNA.3-201ENST00000362331 103 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 RNU6-336P-201ENST00000364891 107 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 Y_RNA.409-201ENST00000383990 98 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 CALM2P3-201ENST00000400429 449 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 RNU2-48P-201ENST00000410694 191 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC243964.1-201ENST00000441814 261 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 RNU7-63P-201ENST00000459054 62 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.78□□□□□ -2.12
CSTF1Q05048 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.78□□□□□ -2.12
CSTF1Q05048 AC108078.1-201ENST00000508073 725 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC009646.1-201ENST00000510455 318 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 RN7SKP256-201ENST00000517201 314 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC103996.1-201ENST00000555468 102 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC004492.1-201ENST00000607036 742 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AF250324.2-201ENST00000608299 610 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 AC109347.2-201ENST00000610220 349 ntBASIC1.78□□□□□ -2.12
CSTF1Q05048 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSTF1Q05048 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-552P-201ENST00000362869 119 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-1120P-201ENST00000362988 108 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-266P-201ENST00000364225 107 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-827P-201ENST00000365553 106 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-259P-201ENST00000383999 107 ntBASIC1.77□□□□□ -2.13
CSTF1Q05048 RNU6-611P-201ENST00000384276 104 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms