Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.58□□□□□ -2.32
CCL20P78556 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.57□□□□□ -2.32
CCL20P78556 HSBP1P2-201ENST00000299671 229 ntBASIC0.57□□□□□ -2.32
CCL20P78556 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CCL20P78556 RNU1-76P-201ENST00000362903 159 ntBASIC0.57□□□□□ -2.32
CCL20P78556 U3.4-201ENST00000363352 213 ntBASIC0.57□□□□□ -2.32
CCL20P78556 RNU6-336P-201ENST00000364891 107 ntBASIC0.57□□□□□ -2.32
CCL20P78556 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCL20P78556 RNU6-378P-201ENST00000384324 107 ntBASIC0.57□□□□□ -2.32
CCL20P78556 RNU6-636P-201ENST00000384598 107 ntBASIC0.57□□□□□ -2.32
CCL20P78556 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CCL20P78556 ELOCP4-201ENST00000420090 333 ntBASIC0.57□□□□□ -2.32
CCL20P78556 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.57□□□□□ -2.32
CCL20P78556 GAPDHP17-201ENST00000449858 1001 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AC007547.1-201ENST00000462177 490 ntBASIC0.57□□□□□ -2.32
CCL20P78556 PDCD5P2-201ENST00000507570 312 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.57□□□□□ -2.32
CCL20P78556 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.57□□□□□ -2.32
CCL20P78556 RNU6-685P-201ENST00000517088 95 ntBASIC0.57□□□□□ -2.32
CCL20P78556 SUMO2P16-201ENST00000519475 264 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.57□□□□□ -2.32
CCL20P78556 AP000873.5-201ENST00000533906 236 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AC090888.2-201ENST00000559765 1144 ntBASIC0.57□□□□□ -2.32
CCL20P78556 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.57□□□□□ -2.32
CCL20P78556 AC090517.1-201ENST00000569307 266 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.57□□□□□ -2.32
CCL20P78556 AL607023.1-201ENST00000620045 248 ntBASIC0.57□□□□□ -2.32
CCL20P78556 AC092268.1-201ENST00000342691 405 ntBASIC0.56□□□□□ -2.32
CCL20P78556 Y_RNA.18-201ENST00000362461 102 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-428P-201ENST00000362942 107 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-534P-201ENST00000364877 106 ntBASIC0.56□□□□□ -2.32
CCL20P78556 SNORA72.2-201ENST00000365028 127 ntBASIC0.56□□□□□ -2.32
CCL20P78556 Y_RNA.324-201ENST00000365165 102 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-533P-201ENST00000384144 107 ntBASIC0.56□□□□□ -2.32
CCL20P78556 Y_RNA.500-201ENST00000384466 111 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-910P-201ENST00000390844 107 ntBASIC0.56□□□□□ -2.32
CCL20P78556 SNORA26.3-201ENST00000391119 136 ntBASIC0.56□□□□□ -2.32
CCL20P78556 MTCO2P21-201ENST00000419780 677 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.56□□□□□ -2.32
CCL20P78556 USP9YP28-201ENST00000435142 589 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.56□□□□□ -2.32
CCL20P78556 SNORD124-201ENST00000459577 104 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.56□□□□□ -2.32
CCL20P78556 RPS23P5-201ENST00000495419 428 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC091435.1-201ENST00000505442 584 ntBASIC0.56□□□□□ -2.32
CCL20P78556 ARL2BPP4-201ENST00000506854 471 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.56□□□□□ -2.32
CCL20P78556 HSPE1P23-201ENST00000509838 286 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
CCL20P78556 RNU6-467P-201ENST00000517027 110 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.56□□□□□ -2.32
CCL20P78556 AP003181.2-201ENST00000528941 181 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.56□□□□□ -2.32
CCL20P78556 AC080078.3-201ENST00000605407 463 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AL139418.1-201ENST00000613613 177 ntBASIC0.56□□□□□ -2.32
CCL20P78556 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC004808.1-201ENST00000627671 721 ntBASIC0.56□□□□□ -2.32
CCL20P78556 MIR338-201ENST00000636369 67 ntBASIC0.56□□□□□ -2.32
CCL20P78556 AC008163.1-202ENST00000636004 2889 ntBASIC0.55□□□□□ -2.32
CCL20P78556 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CCL20P78556 Y_RNA.22-201ENST00000362492 102 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNU6-179P-201ENST00000363350 107 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNU6-660P-201ENST00000364566 109 ntBASIC0.55□□□□□ -2.32
CCL20P78556 SNORD32A-201ENST00000364805 84 ntBASIC0.55□□□□□ -2.32
CCL20P78556 SNORD114-24-201ENST00000365029 72 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNU6-418P-201ENST00000384035 107 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNU6-45P-201ENST00000384471 107 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNA5SP213-201ENST00000391031 106 ntBASIC0.55□□□□□ -2.32
CCL20P78556 SNORD115.1-201ENST00000391109 76 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNU6-387P-201ENST00000411331 105 ntBASIC0.55□□□□□ -2.32
CCL20P78556 AC063976.4-201ENST00000421971 163 ntBASIC0.55□□□□□ -2.32
CCL20P78556 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.55□□□□□ -2.32
CCL20P78556 C1DP4-201ENST00000455429 424 ntBASIC0.55□□□□□ -2.32
CCL20P78556 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.55□□□□□ -2.32
CCL20P78556 RPL39P38-201ENST00000467018 153 ntBASIC0.55□□□□□ -2.32
CCL20P78556 HMGN1P12-201ENST00000499125 195 ntBASIC0.55□□□□□ -2.32
CCL20P78556 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.55□□□□□ -2.32
CCL20P78556 SNORA31.2-201ENST00000516019 134 ntBASIC0.55□□□□□ -2.32
CCL20P78556 SNORA31.4-201ENST00000516049 129 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RNA5SP168-201ENST00000516642 112 ntBASIC0.55□□□□□ -2.32
CCL20P78556 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CCL20P78556 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
CCL20P78556 TMF1P1-201ENST00000576058 373 ntBASIC0.55□□□□□ -2.32
CCL20P78556 MIR4653-201ENST00000585107 83 ntBASIC0.55□□□□□ -2.32
CCL20P78556 AC105148.1-201ENST00000604961 409 ntBASIC0.55□□□□□ -2.32
CCL20P78556 RPL17P51-201ENST00000605218 238 ntBASIC0.55□□□□□ -2.32
CCL20P78556 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.55□□□□□ -2.32
CCL20P78556 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
CCL20P78556 RNU4-79P-201ENST00000362764 141 ntBASIC0.54□□□□□ -2.32
CCL20P78556 RNU6-552P-201ENST00000362869 119 ntBASIC0.54□□□□□ -2.32
CCL20P78556 RNU6-157P-201ENST00000383957 107 ntBASIC0.54□□□□□ -2.32
CCL20P78556 RNU6-116P-201ENST00000384042 109 ntBASIC0.54□□□□□ -2.32
CCL20P78556 MIR608-201ENST00000384820 100 ntBASIC0.54□□□□□ -2.32
CCL20P78556 RNU11-5P-201ENST00000391216 129 ntBASIC0.54□□□□□ -2.32
CCL20P78556 MRPL42P2-201ENST00000403169 426 ntBASIC0.54□□□□□ -2.32
CCL20P78556 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC114482.1-201ENST00000418010 247 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AC002486.1-201ENST00000435098 391 ntBASIC0.54□□□□□ -2.32
CCL20P78556 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.54□□□□□ -2.32
CCL20P78556 Z73417.1-201ENST00000447373 778 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms