Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.14□□□□□ -2.43
PRKDCP78527 MTND4P19-201ENST00000446659 478 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.14□□□□□ -2.43
PRKDCP78527 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
PRKDCP78527 AP000763.2-201ENST00000540641 163 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.14□□□□□ -2.43
PRKDCP78527 AC008993.2-201ENST00000631744 806 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 RNU6-929P-201ENST00000384429 107 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 MTND1P21-201ENST00000412991 285 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AP003392.2-201ENST00000527269 208 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.15□□□□□ -2.43
PRKDCP78527 MIR4709-201ENST00000577272 72 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AL357312.1-201ENST00000603879 298 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 MIR4320-201ENST00000636981 65 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 FCF1P6-201ENST00000456841 595 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 SNORD126-201ENST00000459475 77 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
PRKDCP78527 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.15□□□□□ -2.43
PRKDCP78527 MIR3976-201ENST00000606807 139 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.15□□□□□ -2.43
PRKDCP78527 RNU1-131P-201ENST00000458943 161 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC011005.2-201ENST00000487324 359 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 HMGB1P30-201ENST00000492455 606 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AC091874.1-201ENST00000511402 339 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 RNU2-53P-201ENST00000516257 147 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 COPS8P3-201ENST00000526024 482 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC004832.4-201ENST00000608952 331 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC018926.1-201ENST00000616335 435 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 RNU6-119P-201ENST00000364882 107 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AC096531.1-201ENST00000419107 107 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 RAB28P5-201ENST00000427490 651 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 RNU6-927P-201ENST00000516199 100 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AC106038.2-201ENST00000520706 568 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 SNRPGP1-201ENST00000553864 222 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.15□□□□□ -2.43
PRKDCP78527 AP001429.1-201ENST00000602568 530 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 AL592221.1-201ENST00000605266 382 ntBASIC-0.15□□□□□ -2.43
PRKDCP78527 MIR1305-201ENST00000408300 86 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 AC022364.2-201ENST00000457963 554 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 snoU13.8-201ENST00000458890 104 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 AC104136.1-201ENST00000512969 394 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 AC018630.3-201ENST00000542637 96 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 AC079598.5-201ENST00000547460 117 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 uc_338.36-201ENST00000622331 158 ntBASIC-0.16□□□□□ -2.43
PRKDCP78527 AL390237.1-201ENST00000404226 1415 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.16□□□□□ -2.44
PRKDCP78527 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.16□□□□□ -2.44
PRKDCP78527 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.16□□□□□ -2.44
PRKDCP78527 RPL31P54-201ENST00000429803 370 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.16□□□□□ -2.44
PRKDCP78527 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.16□□□□□ -2.44
PRKDCP78527 AL356157.2-201ENST00000605122 111 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.16□□□□□ -2.44
PRKDCP78527 AP000943.4-201ENST00000622912 357 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AC080188.3-201ENST00000624842 748 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AC112487.2-201ENST00000637950 304 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 MIR1285-2-201ENST00000408311 88 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 RPL39P39-201ENST00000455840 151 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.16□□□□□ -2.44
PRKDCP78527 AC004217.3-201ENST00000551552 878 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AL365434.2-201ENST00000607979 234 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 AC078938.1-201ENST00000620993 318 ntBASIC-0.16□□□□□ -2.44
PRKDCP78527 SNORD114-9-201ENST00000364370 72 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 RNU4-27P-201ENST00000410889 139 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 RNA5SP111-201ENST00000411386 101 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 AC008267.5-201ENST00000424928 265 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.17□□□□□ -2.44
PRKDCP78527 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.17□□□□□ -2.44
PRKDCP78527 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.17□□□□□ -2.44
PRKDCP78527 AL121992.2-201ENST00000606262 256 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
PRKDCP78527 RNU6-212P-201ENST00000362642 104 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 RNU6-223P-201ENST00000362830 107 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 RNU6-878P-201ENST00000384578 110 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC104332.1-201ENST00000440471 797 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AL929288.2-201ENST00000446368 407 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC113410.1-201ENST00000505029 247 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms