Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORA59B-202ENST00000578183 701 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 AC174048.1-201ENST00000603389 144 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 MIR15A-201ENST00000607334 83 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 AC124016.2-201ENST00000610058 665 ntBASIC0.03□□□□□ -2.4
CKS1BP61024 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.03□□□□□ -2.4
CKS1BP61024 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CKS1BP61024 RNU5A-8P-201ENST00000364102 114 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 MRPS36P1-201ENST00000421291 307 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 MTCYBP39-201ENST00000437562 491 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 DAP3P1-201ENST00000441522 278 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AC093899.1-201ENST00000457984 376 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 MTND3P5-201ENST00000512798 333 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 RNU6-405P-201ENST00000516637 110 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 RNU6-467P-201ENST00000517027 110 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AC090888.2-201ENST00000559765 1144 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.02□□□□□ -2.41
CKS1BP61024 OR4H6P-202ENST00000603819 340 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 MIR8084-201ENST00000614105 89 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 AL589743.1-201ENST00000551932 2712 ntBASIC0.02□□□□□ -2.41
CKS1BP61024 RNU6-1285P-201ENST00000363480 105 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 U3.9-201ENST00000363823 204 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 Y_RNA.224-201ENST00000364308 111 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 RNU6-142P-201ENST00000384019 107 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 RNU6-45P-201ENST00000384471 107 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.01□□□□□ -2.41
CKS1BP61024 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.01□□□□□ -2.41
CKS1BP61024 AL031313.1-201ENST00000448435 256 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AP000542.1-201ENST00000448473 371 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.01□□□□□ -2.41
CKS1BP61024 RNU6-1132P-201ENST00000459214 107 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AC011406.1-201ENST00000512440 370 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 RNY4P37-201ENST00000516225 96 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 RNA5SP220-201ENST00000516298 104 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AC087854.1-201ENST00000519706 414 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AL929325.1-201ENST00000603096 117 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 AC024940.5-201ENST00000622889 474 ntBASIC0.01□□□□□ -2.41
CKS1BP61024 SMIM11P1-201ENST00000369586 178 ntBASIC0□□□□□ -2.41
CKS1BP61024 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0□□□□□ -2.41
CKS1BP61024 RNU6-1031P-201ENST00000384773 107 ntBASIC0□□□□□ -2.41
CKS1BP61024 MTCYBP2-201ENST00000407745 171 ntBASIC0□□□□□ -2.41
CKS1BP61024 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0□□□□□ -2.41
CKS1BP61024 TIMM9P2-201ENST00000419324 266 ntBASIC0□□□□□ -2.41
CKS1BP61024 AC022364.2-201ENST00000457963 554 ntBASIC0□□□□□ -2.41
CKS1BP61024 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0□□□□□ -2.41
CKS1BP61024 AC119751.4-201ENST00000507498 357 ntBASIC0□□□□□ -2.41
CKS1BP61024 AP003355.1-201ENST00000518956 587 ntBASIC0□□□□□ -2.41
CKS1BP61024 AC106038.2-201ENST00000520706 568 ntBASIC0□□□□□ -2.41
CKS1BP61024 NTS-203ENST00000551529 801 ntTSL 3 BASIC0□□□□□ -2.41
CKS1BP61024 UBE2Q2P8-201ENST00000560644 102 ntBASIC0□□□□□ -2.41
CKS1BP61024 TPRKBP2-201ENST00000565969 475 ntBASIC0□□□□□ -2.41
CKS1BP61024 AC104072.1-201ENST00000568817 668 ntBASIC0□□□□□ -2.41
CKS1BP61024 AL356157.2-201ENST00000605122 111 ntBASIC0□□□□□ -2.41
CKS1BP61024 CTHRC1P1-201ENST00000605383 469 ntBASIC0□□□□□ -2.41
CKS1BP61024 MIR338-201ENST00000636369 67 ntBASIC0□□□□□ -2.41
CKS1BP61024 MTND5P16-201ENST00000460269 1703 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CKS1BP61024 SNORA75.2-201ENST00000391138 150 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 SNORA75.3-201ENST00000391231 150 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 RNA5SP193-201ENST00000410353 107 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 MTCO1P17-201ENST00000411522 491 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 C1DP2-201ENST00000418167 426 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 AL953862.1-201ENST00000423016 168 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 AL158053.1-201ENST00000441503 453 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
CKS1BP61024 C1DP4-201ENST00000455429 424 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 RPL39P39-201ENST00000455840 151 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 RNU7-14P-201ENST00000459331 62 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 AP000797.1-201ENST00000478870 387 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.01□□□□□ -2.41
CKS1BP61024 MIR3146-201ENST00000580367 79 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 AC080078.2-201ENST00000603766 501 ntBASIC-0.01□□□□□ -2.41
CKS1BP61024 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CKS1BP61024 RNU6-37P-201ENST00000362692 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-11P-201ENST00000364234 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-1-201ENST00000383898 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-190P-201ENST00000384154 102 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-42P-201ENST00000384165 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-36P-201ENST00000384172 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-4P-201ENST00000384205 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-5P-201ENST00000384238 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-3P-201ENST00000384314 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-2-201ENST00000384627 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-9-201ENST00000384776 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU6-33P-201ENST00000384793 107 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 MIR499A-201ENST00000384903 122 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 SNORD41-201ENST00000386967 70 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNA5SP511-201ENST00000410487 115 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 RNU4-22P-201ENST00000411058 166 ntBASIC-0.02□□□□□ -2.41
CKS1BP61024 AC244098.3-201ENST00000424803 96 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms