Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLDN2P57739 AC233981.2-201ENST00000611524 1614 ntBASIC2.54□□□□□ -2
CLDN2P57739 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.54□□□□□ -2
CLDN2P57739 SET-203ENST00000372688 801 ntTSL 2 BASIC2.54□□□□□ -2
CLDN2P57739 Y_RNA.431-201ENST00000384086 102 ntBASIC2.54□□□□□ -2
CLDN2P57739 Y_RNA.473-201ENST00000384333 102 ntBASIC2.54□□□□□ -2
CLDN2P57739 SNORD116-29-201ENST00000384516 83 ntBASIC2.54□□□□□ -2
CLDN2P57739 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
CLDN2P57739 AL590135.1-201ENST00000422215 156 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC019205.3-201ENST00000424573 156 ntBASIC2.54□□□□□ -2
CLDN2P57739 MTND4P28-201ENST00000426217 387 ntBASIC2.54□□□□□ -2
CLDN2P57739 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
CLDN2P57739 AC104332.2-201ENST00000429959 156 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC011816.1-201ENST00000441346 546 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC016700.2-201ENST00000446011 156 ntBASIC2.54□□□□□ -2
CLDN2P57739 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC103975.1-201ENST00000482506 483 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC015911.1-201ENST00000495111 156 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC097473.1-201ENST00000508142 408 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC005741.1-201ENST00000511094 432 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.54□□□□□ -2
CLDN2P57739 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
CLDN2P57739 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.54□□□□□ -2
CLDN2P57739 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.54□□□□□ -2
CLDN2P57739 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.54□□□□□ -2
CLDN2P57739 MIR3945-201ENST00000581853 98 ntBASIC2.54□□□□□ -2
CLDN2P57739 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
CLDN2P57739 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
CLDN2P57739 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
CLDN2P57739 MTND4LP32-201ENST00000636111 270 ntBASIC2.54□□□□□ -2
CLDN2P57739 AL450472.1-202ENST00000637286 180 ntBASIC2.54□□□□□ -2
CLDN2P57739 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
CLDN2P57739 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN2P57739 ZNF299P-201ENST00000406845 1804 ntBASIC2.54□□□□□ -2
CLDN2P57739 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN2P57739 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.53□□□□□ -2
CLDN2P57739 MTND4P29-201ENST00000503122 1372 ntBASIC2.53□□□□□ -2
CLDN2P57739 Y_RNA.58-201ENST00000362807 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 Y_RNA.154-201ENST00000363624 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 RNY3P1-201ENST00000365085 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 Y_RNA.315-201ENST00000365117 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 RNY3-201ENST00000365484 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 Y_RNA.404-201ENST00000383978 102 ntBASIC2.53□□□□□ -2
CLDN2P57739 RNU6-310P-201ENST00000384655 107 ntBASIC2.53□□□□□ -2
CLDN2P57739 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
CLDN2P57739 OOSP1P1-201ENST00000423265 274 ntBASIC2.53□□□□□ -2
CLDN2P57739 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.53□□□□□ -2
CLDN2P57739 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.53□□□□□ -2
CLDN2P57739 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
CLDN2P57739 ELOCP24-201ENST00000456370 334 ntBASIC2.53□□□□□ -2
CLDN2P57739 RNU7-152P-201ENST00000458982 64 ntBASIC2.53□□□□□ -2
CLDN2P57739 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
CLDN2P57739 FO393415.2-201ENST00000480085 343 ntBASIC2.53□□□□□ -2
CLDN2P57739 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.53□□□□□ -2
CLDN2P57739 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.53□□□□□ -2
CLDN2P57739 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.53□□□□□ -2
CLDN2P57739 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.53□□□□□ -2
CLDN2P57739 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.53□□□□□ -2
CLDN2P57739 AC109329.2-201ENST00000519658 482 ntBASIC2.53□□□□□ -2
CLDN2P57739 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.53□□□□□ -2
CLDN2P57739 MIR3117-201ENST00000584034 78 ntBASIC2.53□□□□□ -2
CLDN2P57739 AL034555.1-201ENST00000604816 211 ntBASIC2.53□□□□□ -2
CLDN2P57739 AL670379.2-201ENST00000604983 252 ntBASIC2.53□□□□□ -2
CLDN2P57739 HMGB1P24-202ENST00000615653 685 ntBASIC2.53□□□□□ -2
CLDN2P57739 AL449363.1-201ENST00000617815 186 ntBASIC2.53□□□□□ -2
CLDN2P57739 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN2P57739 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.53□□□□□ -2
CLDN2P57739 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN2P57739 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CLDN2P57739 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN2P57739 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
CLDN2P57739 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 Y_RNA.11-201ENST00000362375 109 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 Y_RNA.535-201ENST00000384612 99 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 MIR27B-201ENST00000385129 97 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 SNORA75.6-201ENST00000391318 127 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 Y_RNA.646-201ENST00000410980 101 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 AC243428.1-201ENST00000421099 264 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN2P57739 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN2P57739 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN2P57739 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN2P57739 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN2P57739 RNU6-1213P-201ENST00000517075 94 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN2P57739 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN2P57739 7SK.7-201ENST00000603504 247 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 AC137590.2-201ENST00000619709 240 ntBASIC2.52□□□□□ -2.01
CLDN2P57739 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN2P57739 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLDN2P57739 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN2P57739 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN2P57739 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN2P57739 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN2P57739 RNU1-72P-201ENST00000362976 153 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RNU5B-2P-201ENST00000363036 113 ntBASIC2.51□□□□□ -2.01
CLDN2P57739 RNU6-595P-201ENST00000363944 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 230.4 ms