Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 HSPE1P18-201ENST00000517602 280 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 MIR5006-201ENST00000583027 110 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 AC011471.1-201ENST00000585766 187 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 AC022441.3-201ENST00000605737 136 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 SNORD11B-201ENST00000607707 90 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.37□□□□□ -1.87
GFRA1P56159 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
GFRA1P56159 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
GFRA1P56159 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA1P56159 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA1P56159 AC006504.1-201ENST00000562493 3666 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 Y_RNA.269-201ENST00000364685 89 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AL359837.1-201ENST00000381357 287 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 ELOCP21-201ENST00000412558 336 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.36□□□□□ -1.87
GFRA1P56159 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA1P56159 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.36□□□□□ -1.87
GFRA1P56159 AL136097.1-201ENST00000456945 913 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.36□□□□□ -1.87
GFRA1P56159 MRPS36P2-201ENST00000512569 299 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 RNU6-344P-201ENST00000516635 111 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.36□□□□□ -1.87
GFRA1P56159 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.36□□□□□ -1.87
GFRA1P56159 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.36□□□□□ -1.87
GFRA1P56159 MIR4429-201ENST00000580105 73 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 MIR4444-1-201ENST00000581696 74 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 MIR4444-2-201ENST00000584390 74 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AC008739.2-201ENST00000597006 317 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AC244505.7-201ENST00000599675 272 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 AL590240.4-201ENST00000616908 390 ntBASIC3.36□□□□□ -1.87
GFRA1P56159 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.36□□□□□ -1.87
GFRA1P56159 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GFRA1P56159 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 MIR410-201ENST00000362222 80 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RNU6-486P-201ENST00000363116 107 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 SNORA73.2-201ENST00000364946 201 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 Y_RNA.383-201ENST00000383855 97 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 SNORA18.2-201ENST00000383865 132 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RNA5SP475-201ENST00000410568 110 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RNU2-14P-201ENST00000411053 191 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.35□□□□□ -1.87
GFRA1P56159 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 GOT2P5-201ENST00000433995 546 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AC009237.7-201ENST00000447357 229 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RPL23AP3-201ENST00000453844 468 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 TRBV12-2-201ENST00000489763 344 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RNU6-107P-201ENST00000516643 102 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 RNU6-182P-201ENST00000516970 105 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.35□□□□□ -1.87
GFRA1P56159 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.35□□□□□ -1.87
GFRA1P56159 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.35□□□□□ -1.87
GFRA1P56159 AC130289.1-201ENST00000577321 73 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
GFRA1P56159 RPL30P11-203ENST00000598995 310 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 MIR3674-201ENST00000636576 68 ntBASIC3.35□□□□□ -1.87
GFRA1P56159 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.35□□□□□ -1.87
GFRA1P56159 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GFRA1P56159 AC135776.4-201ENST00000624300 1904 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GFRA1P56159 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GFRA1P56159 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GFRA1P56159 AC091564.4-201ENST00000533934 2194 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.34□□□□□ -1.87
GFRA1P56159 Y_RNA.117-201ENST00000363294 101 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 RNA5SP322-201ENST00000363617 119 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 Y_RNA.200-201ENST00000364018 102 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 RNU6-1027P-201ENST00000383998 107 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 Y_RNA.415-201ENST00000384012 112 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 Y_RNA.785-201ENST00000384290 109 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 RNU1-89P-201ENST00000384592 164 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 MIR200C-201ENST00000384980 68 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 MIR29B2-201ENST00000385055 81 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.34□□□□□ -1.87
GFRA1P56159 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
GFRA1P56159 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 AC055872.1-201ENST00000570978 278 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.34□□□□□ -1.87
GFRA1P56159 AC110741.2-201ENST00000605278 268 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 SNORA51-201ENST00000606420 132 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 AC004467.1-201ENST00000615678 330 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 AC091932.3-201ENST00000624223 323 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms