Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH13P55290 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH13P55290 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC010486.1-201ENST00000511793 424 ntBASIC2.24□□□□□ -2.05
CDH13P55290 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH13P55290 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
CDH13P55290 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH13P55290 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH13P55290 FGF7P1-201ENST00000582820 288 ntBASIC2.24□□□□□ -2.05
CDH13P55290 Z98751.3-201ENST00000604447 521 ntBASIC2.24□□□□□ -2.05
CDH13P55290 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AL132822.1-201ENST00000617063 513 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC009248.2-201ENST00000619826 254 ntBASIC2.24□□□□□ -2.05
CDH13P55290 ZNF720P1-201ENST00000562403 1939 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH13P55290 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH13P55290 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH13P55290 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDH13P55290 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH13P55290 Y_RNA.301-201ENST00000364990 103 ntBASIC2.23□□□□□ -2.05
CDH13P55290 RNU6-1286P-201ENST00000383871 107 ntBASIC2.23□□□□□ -2.05
CDH13P55290 SNORA32.2-201ENST00000384049 122 ntBASIC2.23□□□□□ -2.05
CDH13P55290 Y_RNA.510-201ENST00000384511 114 ntBASIC2.23□□□□□ -2.05
CDH13P55290 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
CDH13P55290 MIR521-1-201ENST00000384902 87 ntBASIC2.23□□□□□ -2.05
CDH13P55290 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
CDH13P55290 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDH13P55290 SNORA46.1-201ENST00000391069 153 ntBASIC2.23□□□□□ -2.05
CDH13P55290 FGF7P8-201ENST00000402994 292 ntBASIC2.23□□□□□ -2.05
CDH13P55290 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC012306.1-201ENST00000423267 114 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH13P55290 RNU6-329P-201ENST00000459618 107 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH13P55290 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH13P55290 PTP4A1P4-201ENST00000512479 322 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH13P55290 RNU4-49P-201ENST00000516080 140 ntBASIC2.23□□□□□ -2.05
CDH13P55290 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
CDH13P55290 RNA5SP137-201ENST00000516833 135 ntBASIC2.23□□□□□ -2.05
CDH13P55290 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH13P55290 AC107953.1-201ENST00000522216 297 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDH13P55290 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH13P55290 MIR3126-201ENST00000577443 74 ntBASIC2.23□□□□□ -2.05
CDH13P55290 SNRPGP17-201ENST00000603780 214 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
CDH13P55290 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
CDH13P55290 AC063943.3-201ENST00000615562 356 ntBASIC2.23□□□□□ -2.05
CDH13P55290 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
CDH13P55290 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDH13P55290 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH13P55290 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH13P55290 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH13P55290 Y_RNA.111-201ENST00000363248 100 ntBASIC2.22□□□□□ -2.05
CDH13P55290 Y_RNA.151-201ENST00000363566 112 ntBASIC2.22□□□□□ -2.05
CDH13P55290 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AL356776.1-201ENST00000406574 447 ntBASIC2.22□□□□□ -2.05
CDH13P55290 MIR1294-201ENST00000408503 142 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AL590632.1-201ENST00000424289 371 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH13P55290 RN7SL636P-201ENST00000497504 294 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AC018710.1-201ENST00000506509 158 ntBASIC2.22□□□□□ -2.05
CDH13P55290 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH13P55290 RNU6-566P-201ENST00000516790 107 ntBASIC2.22□□□□□ -2.05
CDH13P55290 RNU6-667P-201ENST00000517186 102 ntBASIC2.22□□□□□ -2.05
CDH13P55290 RNA5SP454-201ENST00000517231 127 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.22□□□□□ -2.05
CDH13P55290 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH13P55290 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AC006023.1-201ENST00000603944 259 ntBASIC2.22□□□□□ -2.05
CDH13P55290 PCGEM1.1-201ENST00000613431 131 ntBASIC2.22□□□□□ -2.05
CDH13P55290 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH13P55290 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH13P55290 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CDH13P55290 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDH13P55290 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH13P55290 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH13P55290 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CDH13P55290 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
CDH13P55290 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
CDH13P55290 Y_RNA.123-201ENST00000363338 102 ntBASIC2.21□□□□□ -2.06
CDH13P55290 RNU6-790P-201ENST00000384479 105 ntBASIC2.21□□□□□ -2.06
CDH13P55290 MTND1P23-201ENST00000416931 372 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AL139413.1-201ENST00000421309 217 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AL139415.2-201ENST00000431968 163 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH13P55290 AL353572.1-201ENST00000442490 417 ntBASIC2.21□□□□□ -2.06
CDH13P55290 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH13P55290 MTND1P17-201ENST00000448961 204 ntBASIC2.21□□□□□ -2.06
CDH13P55290 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH13P55290 RPL31P58-201ENST00000469001 379 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms