Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPS29P12-201ENST00000460178 152 ntBASIC2.58□□□□□ -2
CDH12P55289 RPL36AP48-201ENST00000485521 314 ntBASIC2.58□□□□□ -2
CDH12P55289 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.58□□□□□ -2
CDH12P55289 RNU4-77P-201ENST00000516692 156 ntBASIC2.58□□□□□ -2
CDH12P55289 AC079598.5-201ENST00000547460 117 ntBASIC2.58□□□□□ -2
CDH12P55289 AC087588.2-201ENST00000617667 426 ntBASIC2.58□□□□□ -2
CDH12P55289 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDH12P55289 AC092268.1-201ENST00000342691 405 ntBASIC2.57□□□□□ -2
CDH12P55289 Y_RNA.80-201ENST00000362996 102 ntBASIC2.57□□□□□ -2
CDH12P55289 Y_RNA.162-201ENST00000363683 102 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU4-9P-201ENST00000364951 139 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU6-142P-201ENST00000384019 107 ntBASIC2.57□□□□□ -2
CDH12P55289 Y_RNA.485-201ENST00000384395 102 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU6-700P-201ENST00000391043 107 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU6-1328P-201ENST00000410938 106 ntBASIC2.57□□□□□ -2
CDH12P55289 MTCYBP10-201ENST00000424905 650 ntBASIC2.57□□□□□ -2
CDH12P55289 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
CDH12P55289 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.57□□□□□ -2
CDH12P55289 AC009296.1-201ENST00000443146 155 ntBASIC2.57□□□□□ -2
CDH12P55289 snoU13.14-201ENST00000459372 104 ntBASIC2.57□□□□□ -2
CDH12P55289 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
CDH12P55289 AC083906.5-201ENST00000503722 328 ntBASIC2.57□□□□□ -2
CDH12P55289 AC091826.1-201ENST00000514065 313 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU5F-2P-201ENST00000516066 82 ntBASIC2.57□□□□□ -2
CDH12P55289 RNU6-1137P-201ENST00000517073 99 ntBASIC2.57□□□□□ -2
CDH12P55289 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
CDH12P55289 CBX3P7-201ENST00000532876 502 ntBASIC2.57□□□□□ -2
CDH12P55289 AC016256.1-201ENST00000547971 354 ntBASIC2.57□□□□□ -2
CDH12P55289 AC104581.2-201ENST00000572227 430 ntBASIC2.57□□□□□ -2
CDH12P55289 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.57□□□□□ -2
CDH12P55289 AL360085.1-201ENST00000604713 532 ntBASIC2.57□□□□□ -2
CDH12P55289 SNORD58B-201ENST00000607313 66 ntBASIC2.57□□□□□ -2
CDH12P55289 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.57□□□□□ -2
CDH12P55289 MIR8057-201ENST00000620957 69 ntBASIC2.57□□□□□ -2
CDH12P55289 AC138305.3-201ENST00000624988 240 ntBASIC2.57□□□□□ -2
CDH12P55289 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.57□□□□□ -2
CDH12P55289 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH12P55289 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH12P55289 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 AP000560.1-201ENST00000624150 1937 ntBASIC2.56□□□□□ -2
CDH12P55289 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
CDH12P55289 SNORA63C-201ENST00000364578 129 ntBASIC2.56□□□□□ -2
CDH12P55289 RNU4-42P-201ENST00000364738 142 ntBASIC2.56□□□□□ -2
CDH12P55289 Y_RNA.364-201ENST00000365532 101 ntBASIC2.56□□□□□ -2
CDH12P55289 MIR606-201ENST00000384851 96 ntBASIC2.56□□□□□ -2
CDH12P55289 MIR186-201ENST00000384988 86 ntBASIC2.56□□□□□ -2
CDH12P55289 MRPL42P3-201ENST00000401492 326 ntBASIC2.56□□□□□ -2
CDH12P55289 AL590135.1-201ENST00000422215 156 ntBASIC2.56□□□□□ -2
CDH12P55289 AC019205.3-201ENST00000424573 156 ntBASIC2.56□□□□□ -2
CDH12P55289 AC096644.2-201ENST00000429278 159 ntBASIC2.56□□□□□ -2
CDH12P55289 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.56□□□□□ -2
CDH12P55289 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.56□□□□□ -2
CDH12P55289 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.56□□□□□ -2
CDH12P55289 AC016700.2-201ENST00000446011 156 ntBASIC2.56□□□□□ -2
CDH12P55289 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
CDH12P55289 snoU13.6-201ENST00000458785 104 ntBASIC2.56□□□□□ -2
CDH12P55289 snoU13.30-201ENST00000458951 104 ntBASIC2.56□□□□□ -2
CDH12P55289 TOMM22P6-201ENST00000465035 409 ntBASIC2.56□□□□□ -2
CDH12P55289 AC087477.1-201ENST00000465747 340 ntBASIC2.56□□□□□ -2
CDH12P55289 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.56□□□□□ -2
CDH12P55289 AC015911.1-201ENST00000495111 156 ntBASIC2.56□□□□□ -2
CDH12P55289 AIG1P1-201ENST00000503376 148 ntBASIC2.56□□□□□ -2
CDH12P55289 AC021146.2-201ENST00000504736 556 ntBASIC2.56□□□□□ -2
CDH12P55289 SNORA25.10-201ENST00000515926 124 ntBASIC2.56□□□□□ -2
CDH12P55289 RNA5SP341-201ENST00000516261 117 ntBASIC2.56□□□□□ -2
CDH12P55289 SCARNA13-201ENST00000516672 275 ntBASIC2.56□□□□□ -2
CDH12P55289 SCARNA11.3-201ENST00000517276 130 ntBASIC2.56□□□□□ -2
CDH12P55289 AC109329.1-201ENST00000518744 317 ntBASIC2.56□□□□□ -2
CDH12P55289 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 AC115990.1-201ENST00000526957 301 ntBASIC2.56□□□□□ -2
CDH12P55289 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.56□□□□□ -2
CDH12P55289 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
CDH12P55289 AC073410.2-201ENST00000603240 332 ntBASIC2.56□□□□□ -2
CDH12P55289 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
CDH12P55289 AL355802.3-201ENST00000607571 545 ntBASIC2.56□□□□□ -2
CDH12P55289 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.56□□□□□ -2
CDH12P55289 MIR3651-201ENST00000630427 90 ntBASIC2.56□□□□□ -2
CDH12P55289 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
CDH12P55289 AL359854.1-201ENST00000614203 1594 ntBASIC2.56□□□□□ -2
CDH12P55289 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
CDH12P55289 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDH12P55289 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
CDH12P55289 RNU1-57P-201ENST00000384491 166 ntBASIC2.55□□□□□ -2
CDH12P55289 RNU6-738P-201ENST00000384531 106 ntBASIC2.55□□□□□ -2
CDH12P55289 RNU6-1160P-201ENST00000384546 104 ntBASIC2.55□□□□□ -2
CDH12P55289 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
CDH12P55289 MIR487A-201ENST00000385009 80 ntBASIC2.55□□□□□ -2
CDH12P55289 SNORA48.5-201ENST00000391143 135 ntBASIC2.55□□□□□ -2
CDH12P55289 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
CDH12P55289 MIR190B-201ENST00000401119 79 ntBASIC2.55□□□□□ -2
CDH12P55289 AC007098.1-201ENST00000420122 367 ntBASIC2.55□□□□□ -2
CDH12P55289 AC097463.2-201ENST00000421074 142 ntBASIC2.55□□□□□ -2
CDH12P55289 MTND2P23-201ENST00000422990 651 ntBASIC2.55□□□□□ -2
CDH12P55289 ZNF72P-201ENST00000425869 1908 ntBASIC2.55□□□□□ -2
CDH12P55289 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.55□□□□□ -2
CDH12P55289 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.55□□□□□ -2
CDH12P55289 AL353752.1-201ENST00000454946 260 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms