Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL591034.2-201ENST00000402839 359 ntBASIC2.29□□□□□ -2.04
CDH11P55287 U6atac.2-201ENST00000408644 118 ntBASIC2.29□□□□□ -2.04
CDH11P55287 RNU6-1050P-201ENST00000410388 107 ntBASIC2.29□□□□□ -2.04
CDH11P55287 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH11P55287 AC244670.1-201ENST00000436879 112 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 RPL22P13-201ENST00000493291 347 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH11P55287 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH11P55287 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH11P55287 RNU5F-2P-201ENST00000516066 82 ntBASIC2.29□□□□□ -2.04
CDH11P55287 RN7SKP40-201ENST00000517211 242 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.29□□□□□ -2.04
CDH11P55287 FRG2DP-202ENST00000566967 323 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC105137.2-201ENST00000569073 466 ntBASIC2.29□□□□□ -2.04
CDH11P55287 MIR5571-201ENST00000577998 113 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC073410.2-201ENST00000603240 332 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC009318.2-201ENST00000610917 651 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH11P55287 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH11P55287 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CDH11P55287 KPNA2P1-201ENST00000458289 1591 ntBASIC2.28□□□□□ -2.04
CDH11P55287 OR56A5-201ENST00000340110 738 ntBASIC2.28□□□□□ -2.04
CDH11P55287 Y_RNA.61-201ENST00000362835 102 ntBASIC2.28□□□□□ -2.04
CDH11P55287 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH11P55287 RNU6-301P-201ENST00000384277 107 ntBASIC2.28□□□□□ -2.04
CDH11P55287 RNU6-933P-201ENST00000384424 107 ntBASIC2.28□□□□□ -2.04
CDH11P55287 MIR521-1-201ENST00000384902 87 ntBASIC2.28□□□□□ -2.04
CDH11P55287 MIR627-201ENST00000384979 97 ntBASIC2.28□□□□□ -2.04
CDH11P55287 RNU6-220P-201ENST00000390919 107 ntBASIC2.28□□□□□ -2.04
CDH11P55287 BTF3L4P2-201ENST00000392798 346 ntBASIC2.28□□□□□ -2.04
CDH11P55287 CBX3P9-201ENST00000402326 552 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH11P55287 AC138623.1-201ENST00000418060 216 ntBASIC2.28□□□□□ -2.04
CDH11P55287 BX276092.3-201ENST00000424182 230 ntBASIC2.28□□□□□ -2.04
CDH11P55287 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH11P55287 Y_RNA.632-201ENST00000459189 102 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AC080013.2-201ENST00000460866 323 ntBASIC2.28□□□□□ -2.04
CDH11P55287 SMURF2P1-201ENST00000514992 481 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH11P55287 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH11P55287 MIR4795-201ENST00000584182 89 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AL078605.1-201ENST00000603529 500 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH11P55287 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.28□□□□□ -2.04
CDH11P55287 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDH11P55287 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.28□□□□□ -2.05
CDH11P55287 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH11P55287 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH11P55287 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH11P55287 Y_RNA.123-201ENST00000363338 102 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RNU6-370P-201ENST00000411008 104 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AF228730.4-201ENST00000421457 183 ntBASIC2.27□□□□□ -2.05
CDH11P55287 EIF4EP2-201ENST00000422816 654 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH11P55287 CR769767.1-201ENST00000436337 346 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AL513328.1-201ENST00000446460 224 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RPL7P42-201ENST00000481005 679 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RPL23AP70-201ENST00000483361 460 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH11P55287 AC022447.4-201ENST00000504053 364 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC005741.1-201ENST00000511094 432 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH11P55287 RNU6-559P-201ENST00000516151 98 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RNU2-53P-201ENST00000516257 147 ntBASIC2.27□□□□□ -2.05
CDH11P55287 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
CDH11P55287 Y_RNA.708-201ENST00000516950 96 ntBASIC2.27□□□□□ -2.05
CDH11P55287 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC115990.1-201ENST00000526957 301 ntBASIC2.27□□□□□ -2.05
CDH11P55287 COX6CP5-201ENST00000527162 228 ntBASIC2.27□□□□□ -2.05
CDH11P55287 MRPS36P4-201ENST00000534436 298 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC016256.1-201ENST00000547971 354 ntBASIC2.27□□□□□ -2.05
CDH11P55287 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.27□□□□□ -2.05
CDH11P55287 HSPE1P4-201ENST00000550617 308 ntBASIC2.27□□□□□ -2.05
CDH11P55287 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
CDH11P55287 MIR3199-1-201ENST00000582434 88 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC009229.3-201ENST00000608056 282 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
CDH11P55287 AC009541.1-201ENST00000438279 2662 ntBASIC2.27□□□□□ -2.05
CDH11P55287 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDH11P55287 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CDH11P55287 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
CDH11P55287 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CDH11P55287 MTND4P27-201ENST00000450813 1354 ntBASIC2.26□□□□□ -2.05
CDH11P55287 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
CDH11P55287 Y_RNA.58-201ENST00000362807 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 Y_RNA.67-201ENST00000362870 100 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNU6-797P-201ENST00000363101 109 ntBASIC2.26□□□□□ -2.05
CDH11P55287 Y_RNA.154-201ENST00000363624 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNU6-1210P-201ENST00000363775 107 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNY3P1-201ENST00000365085 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNA5SP126-201ENST00000365092 109 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNY3-201ENST00000365484 102 ntBASIC2.26□□□□□ -2.05
CDH11P55287 RNU6-1286P-201ENST00000383871 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms