Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.04□□□□□ -2.08
VCPP55072 AC090115.3-201ENST00000553218 849 ntBASIC2.04□□□□□ -2.08
VCPP55072 MIR4303-201ENST00000581299 66 ntBASIC2.04□□□□□ -2.08
VCPP55072 RPL30P11-203ENST00000598995 310 ntBASIC2.04□□□□□ -2.08
VCPP55072 AL713866.2-201ENST00000603579 219 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC064807.4-201ENST00000607201 407 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC092954.2-201ENST00000609103 430 ntBASIC2.04□□□□□ -2.08
VCPP55072 AC097372.5-201ENST00000623665 376 ntBASIC2.04□□□□□ -2.08
VCPP55072 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
VCPP55072 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
VCPP55072 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
VCPP55072 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
VCPP55072 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.03□□□□□ -2.08
VCPP55072 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
VCPP55072 RNU6-105P-201ENST00000363909 104 ntBASIC2.03□□□□□ -2.08
VCPP55072 SNORD116-4-201ENST00000384733 96 ntBASIC2.03□□□□□ -2.08
VCPP55072 MIR613-201ENST00000385248 95 ntBASIC2.03□□□□□ -2.08
VCPP55072 RNA5SP219-201ENST00000390940 113 ntBASIC2.03□□□□□ -2.08
VCPP55072 RNU2-20P-201ENST00000410425 191 ntBASIC2.03□□□□□ -2.08
VCPP55072 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.03□□□□□ -2.08
VCPP55072 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.03□□□□□ -2.08
VCPP55072 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
VCPP55072 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 RPL30P12-201ENST00000474666 353 ntBASIC2.03□□□□□ -2.08
VCPP55072 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 RNU6-506P-201ENST00000516553 94 ntBASIC2.03□□□□□ -2.08
VCPP55072 ANP32BP3-201ENST00000559213 706 ntBASIC2.03□□□□□ -2.08
VCPP55072 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.03□□□□□ -2.08
VCPP55072 MIR3683-201ENST00000580847 82 ntBASIC2.03□□□□□ -2.08
VCPP55072 AC007792.1-201ENST00000623023 402 ntBASIC2.03□□□□□ -2.08
VCPP55072 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
VCPP55072 RNU4-66P-201ENST00000365199 138 ntBASIC2.02□□□□□ -2.09
VCPP55072 Y_RNA.372-201ENST00000365599 102 ntBASIC2.02□□□□□ -2.09
VCPP55072 RNU6-38P-201ENST00000384085 107 ntBASIC2.02□□□□□ -2.09
VCPP55072 RNU6-780P-201ENST00000391030 104 ntBASIC2.02□□□□□ -2.09
VCPP55072 AL627390.1-201ENST00000396055 340 ntBASIC2.02□□□□□ -2.09
VCPP55072 AL591034.2-201ENST00000402839 359 ntBASIC2.02□□□□□ -2.09
VCPP55072 SUMO2P12-201ENST00000405924 140 ntBASIC2.02□□□□□ -2.09
VCPP55072 RNU6-648P-201ENST00000410190 107 ntBASIC2.02□□□□□ -2.09
VCPP55072 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.02□□□□□ -2.09
VCPP55072 HMGN2P19-201ENST00000425149 265 ntBASIC2.02□□□□□ -2.09
VCPP55072 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.02□□□□□ -2.09
VCPP55072 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
VCPP55072 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.02□□□□□ -2.09
VCPP55072 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.02□□□□□ -2.09
VCPP55072 RPL23AP3-201ENST00000453844 468 ntBASIC2.02□□□□□ -2.09
VCPP55072 TPTE2P5-203ENST00000458118 728 ntBASIC2.02□□□□□ -2.09
VCPP55072 RNU6-333P-201ENST00000459117 107 ntBASIC2.02□□□□□ -2.09
VCPP55072 AC087884.1-201ENST00000469738 328 ntBASIC2.02□□□□□ -2.09
VCPP55072 HMGB1P35-201ENST00000503360 598 ntBASIC2.02□□□□□ -2.09
VCPP55072 SNORA48.11-201ENST00000517015 89 ntBASIC2.02□□□□□ -2.09
VCPP55072 CYCSP27-201ENST00000527643 293 ntBASIC2.02□□□□□ -2.09
VCPP55072 HMGB1P33-201ENST00000563485 527 ntBASIC2.02□□□□□ -2.09
VCPP55072 AC005034.5-201ENST00000604219 466 ntBASIC2.02□□□□□ -2.09
VCPP55072 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCPP55072 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.01□□□□□ -2.09
VCPP55072 RNU6-212P-201ENST00000362642 104 ntBASIC2.01□□□□□ -2.09
VCPP55072 RNU6-655P-201ENST00000362858 107 ntBASIC2.01□□□□□ -2.09
VCPP55072 Y_RNA.112-201ENST00000363250 102 ntBASIC2.01□□□□□ -2.09
VCPP55072 RNU6-82P-201ENST00000363970 107 ntBASIC2.01□□□□□ -2.09
VCPP55072 MIR544A-201ENST00000384855 91 ntBASIC2.01□□□□□ -2.09
VCPP55072 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VCPP55072 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCPP55072 MTND3P21-201ENST00000433774 331 ntBASIC2.01□□□□□ -2.09
VCPP55072 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.01□□□□□ -2.09
VCPP55072 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.01□□□□□ -2.09
VCPP55072 RPL39P29-201ENST00000447779 157 ntBASIC2.01□□□□□ -2.09
VCPP55072 AL031274.1-201ENST00000450334 232 ntBASIC2.01□□□□□ -2.09
VCPP55072 AC013470.1-201ENST00000453438 462 ntBASIC2.01□□□□□ -2.09
VCPP55072 snoU13.14-201ENST00000459372 104 ntBASIC2.01□□□□□ -2.09
VCPP55072 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.01□□□□□ -2.09
VCPP55072 AL121594.1-201ENST00000475906 575 ntBASIC2.01□□□□□ -2.09
VCPP55072 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
VCPP55072 MIR449C-201ENST00000516047 92 ntBASIC2.01□□□□□ -2.09
VCPP55072 RNU6-1038P-201ENST00000516516 104 ntBASIC2.01□□□□□ -2.09
VCPP55072 RNU6-314P-201ENST00000516574 104 ntBASIC2.01□□□□□ -2.09
VCPP55072 Y_RNA.704-201ENST00000516851 102 ntBASIC2.01□□□□□ -2.09
VCPP55072 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.01□□□□□ -2.09
VCPP55072 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.01□□□□□ -2.09
VCPP55072 COPS8P3-201ENST00000526024 482 ntBASIC2.01□□□□□ -2.09
VCPP55072 CENPUP1-201ENST00000526649 1202 ntBASIC2.01□□□□□ -2.09
VCPP55072 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.01□□□□□ -2.09
VCPP55072 DNAJC19P9-201ENST00000555084 351 ntBASIC2.01□□□□□ -2.09
VCPP55072 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
VCPP55072 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.01□□□□□ -2.09
VCPP55072 RNU6-85P-201ENST00000605989 107 ntBASIC2.01□□□□□ -2.09
VCPP55072 AF250324.2-201ENST00000608299 610 ntBASIC2.01□□□□□ -2.09
VCPP55072 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
VCPP55072 AC005296.1-201ENST00000616145 209 ntBASIC2.01□□□□□ -2.09
VCPP55072 AC008121.3-201ENST00000618726 433 ntBASIC2.01□□□□□ -2.09
VCPP55072 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VCPP55072 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.01□□□□□ -2.09
VCPP55072 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VCPP55072 RNU6-428P-201ENST00000362942 107 ntBASIC2□□□□□ -2.09
VCPP55072 RNU1-23P-201ENST00000363361 144 ntBASIC2□□□□□ -2.09
VCPP55072 RNA5SP325-201ENST00000363756 130 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms