Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC026782.1-201ENST00000512952 449 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 ACA59.1-201ENST00000515966 143 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU5F-2P-201ENST00000516066 82 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.65□□□□□ -1.99
NR1H2P55055 AC016256.1-201ENST00000547971 354 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 FRG2DP-202ENST00000566967 323 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 AC018462.2-201ENST00000605375 395 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 MIR8076-201ENST00000611401 83 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H2P55055 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.64□□□□□ -1.99
NR1H2P55055 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NR1H2P55055 U8.8-201ENST00000365399 135 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NR1H2P55055 SNORD67-201ENST00000390833 111 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 RNU6-1050P-201ENST00000410388 107 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 Z82209.1-201ENST00000422141 2135 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 SNORD5.1-201ENST00000458800 75 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H2P55055 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.64□□□□□ -1.99
NR1H2P55055 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H2P55055 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H2P55055 GTF3AP2-201ENST00000557014 266 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H2P55055 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.64□□□□□ -1.99
NR1H2P55055 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 SNORD98-201ENST00000636377 67 ntBASIC2.64□□□□□ -1.99
NR1H2P55055 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H2P55055 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H2P55055 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NR1H2P55055 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC009541.1-201ENST00000438279 2662 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.61-201ENST00000362835 102 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.123-201ENST00000363338 102 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 SNORA54-201ENST00000384281 123 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 RNU6-1297P-201ENST00000384415 104 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 RNA5SP181-201ENST00000410246 98 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.594-201ENST00000410373 140 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 HMGB3P2-201ENST00000411913 584 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC007064.1-201ENST00000412238 351 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
NR1H2P55055 CBX3P6-201ENST00000430257 527 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.632-201ENST00000459189 102 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC091874.1-201ENST00000511402 339 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.670-201ENST00000516255 105 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 Y_RNA.708-201ENST00000516950 96 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.63□□□□□ -1.99
NR1H2P55055 CBX3P7-201ENST00000532876 502 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 APOOP3-201ENST00000536787 586 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC021231.3-201ENST00000558497 370 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.63□□□□□ -1.99
NR1H2P55055 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.63□□□□□ -1.99
NR1H2P55055 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.63□□□□□ -1.99
NR1H2P55055 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
NR1H2P55055 AC078795.3-201ENST00000602913 472 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AL034555.1-201ENST00000604816 211 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 AC009229.3-201ENST00000608056 282 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 PISRT1.1-201ENST00000616930 107 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 MTND4LP32-201ENST00000636111 270 ntBASIC2.63□□□□□ -1.99
NR1H2P55055 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NR1H2P55055 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.63□□□□□ -1.99
NR1H2P55055 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.63□□□□□ -1.99
NR1H2P55055 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NR1H2P55055 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NR1H2P55055 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NR1H2P55055 SNORA26.3-201ENST00000391119 136 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H2P55055 AL590135.1-201ENST00000422215 156 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC019205.3-201ENST00000424573 156 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.62□□□□□ -1.99
NR1H2P55055 AC016700.2-201ENST00000446011 156 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 RPS29P26-201ENST00000477483 171 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC104564.1-201ENST00000493028 407 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC015911.1-201ENST00000495111 156 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H2P55055 RNA5SP356-201ENST00000515972 94 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 RNU6-1213P-201ENST00000517075 94 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC018630.3-201ENST00000542637 96 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.62□□□□□ -1.99
NR1H2P55055 AC109446.1-201ENST00000566172 220 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H2P55055 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.62□□□□□ -1.99
NR1H2P55055 AC011494.1-201ENST00000596454 237 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 AP000654.2-201ENST00000605633 586 ntBASIC2.62□□□□□ -1.99
NR1H2P55055 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.62□□□□□ -1.99
NR1H2P55055 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NR1H2P55055 MTND4P29-201ENST00000503122 1372 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 KPNA2P1-201ENST00000458289 1591 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.61□□□□□ -1.99
NR1H2P55055 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 Y_RNA.2-201ENST00000362330 96 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 RNU4-79P-201ENST00000362764 141 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 RNU6-842P-201ENST00000384269 107 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 Y_RNA.509-201ENST00000384506 99 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 SNORA75.4-201ENST00000391278 119 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms