Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BTF3L4P2-201ENST00000392798 346 ntBASIC2.96□□□□□ -1.94
COPB1P53618 RNU6-1077P-201ENST00000410506 102 ntBASIC2.96□□□□□ -1.94
COPB1P53618 RNA5SP494-201ENST00000410653 129 ntBASIC2.96□□□□□ -1.94
COPB1P53618 EEF1A1P41-201ENST00000414667 207 ntBASIC2.96□□□□□ -1.94
COPB1P53618 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.96□□□□□ -1.94
COPB1P53618 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.96□□□□□ -1.94
COPB1P53618 AC124916.1-201ENST00000444020 547 ntBASIC2.96□□□□□ -1.94
COPB1P53618 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.96□□□□□ -1.94
COPB1P53618 SNORA31.1-201ENST00000515993 133 ntBASIC2.96□□□□□ -1.94
COPB1P53618 SNORA31.5-201ENST00000516190 133 ntBASIC2.96□□□□□ -1.94
COPB1P53618 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
COPB1P53618 ACA59.2-201ENST00000517061 156 ntBASIC2.96□□□□□ -1.94
COPB1P53618 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.96□□□□□ -1.94
COPB1P53618 AL117187.1-201ENST00000555482 181 ntBASIC2.96□□□□□ -1.94
COPB1P53618 AC006023.1-201ENST00000603944 259 ntBASIC2.96□□□□□ -1.94
COPB1P53618 MIR3199-2-201ENST00000636243 86 ntBASIC2.96□□□□□ -1.94
COPB1P53618 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COPB1P53618 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COPB1P53618 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COPB1P53618 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.95□□□□□ -1.94
COPB1P53618 Y_RNA.39-201ENST00000362620 98 ntBASIC2.95□□□□□ -1.94
COPB1P53618 Y_RNA.455-201ENST00000384230 98 ntBASIC2.95□□□□□ -1.94
COPB1P53618 HMGB3P2-201ENST00000411913 584 ntBASIC2.95□□□□□ -1.94
COPB1P53618 RPL23AP95-201ENST00000426806 265 ntBASIC2.95□□□□□ -1.94
COPB1P53618 RPS15AP5-201ENST00000436276 388 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AL161651.1-201ENST00000440882 223 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC015911.1-201ENST00000495111 156 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.95□□□□□ -1.94
COPB1P53618 AC091874.1-201ENST00000511402 339 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.95□□□□□ -1.94
COPB1P53618 RNU7-4P-201ENST00000516961 62 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.95□□□□□ -1.94
COPB1P53618 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.95□□□□□ -1.94
COPB1P53618 AC004584.2-201ENST00000570407 410 ntBASIC2.95□□□□□ -1.94
COPB1P53618 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
COPB1P53618 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC091152.3-201ENST00000604227 325 ntBASIC2.95□□□□□ -1.94
COPB1P53618 MIR1244-1-201ENST00000612829 85 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AC024581.2-201ENST00000619986 252 ntBASIC2.95□□□□□ -1.94
COPB1P53618 AL078596.1-201ENST00000624856 447 ntBASIC2.95□□□□□ -1.94
COPB1P53618 MIR1244-3-201ENST00000635744 85 ntBASIC2.95□□□□□ -1.94
COPB1P53618 MIR1244-2-201ENST00000636449 85 ntBASIC2.95□□□□□ -1.94
COPB1P53618 MIR1244-4-202ENST00000636813 85 ntBASIC2.95□□□□□ -1.94
COPB1P53618 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
COPB1P53618 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
COPB1P53618 HAUS6P2-201ENST00000433254 2404 ntBASIC2.94□□□□□ -1.94
COPB1P53618 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
COPB1P53618 RNU6-874P-201ENST00000362390 105 ntBASIC2.94□□□□□ -1.94
COPB1P53618 RNU6-858P-201ENST00000362436 107 ntBASIC2.94□□□□□ -1.94
COPB1P53618 RNY3P11-201ENST00000364153 102 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.94□□□□□ -1.94
COPB1P53618 MTCYBP10-201ENST00000424905 650 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AL365496.1-201ENST00000426885 215 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.94□□□□□ -1.94
COPB1P53618 AL513124.1-201ENST00000450410 614 ntBASIC2.94□□□□□ -1.94
COPB1P53618 RN7SKP210-201ENST00000459176 261 ntBASIC2.94□□□□□ -1.94
COPB1P53618 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.94□□□□□ -1.94
COPB1P53618 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.94□□□□□ -1.94
COPB1P53618 CKS1BP7-201ENST00000522230 235 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AL590705.4-201ENST00000532209 134 ntBASIC2.94□□□□□ -1.94
COPB1P53618 MRPS36P4-201ENST00000534436 298 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AC104581.2-201ENST00000572227 430 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AC113195.1-201ENST00000579952 141 ntBASIC2.94□□□□□ -1.94
COPB1P53618 MIR5188-201ENST00000583467 113 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AC019159.1-201ENST00000605094 187 ntBASIC2.94□□□□□ -1.94
COPB1P53618 AL356157.2-201ENST00000605122 111 ntBASIC2.94□□□□□ -1.94
COPB1P53618 MIR3529-201ENST00000637713 78 ntBASIC2.94□□□□□ -1.94
COPB1P53618 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COPB1P53618 AC009541.1-201ENST00000438279 2662 ntBASIC2.94□□□□□ -1.94
COPB1P53618 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
COPB1P53618 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 RNU6-1309P-201ENST00000363305 108 ntBASIC2.93□□□□□ -1.94
COPB1P53618 Y_RNA.153-201ENST00000363615 91 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RNU1-112P-201ENST00000364401 164 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RNU6-487P-201ENST00000365430 104 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RNU6-622P-201ENST00000384272 103 ntBASIC2.93□□□□□ -1.94
COPB1P53618 MIR625-201ENST00000385047 85 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RNA5SP210-201ENST00000391034 120 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RNU6-823P-201ENST00000391042 103 ntBASIC2.93□□□□□ -1.94
COPB1P53618 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
COPB1P53618 AC096644.2-201ENST00000429278 159 ntBASIC2.93□□□□□ -1.94
COPB1P53618 U8.20-201ENST00000459445 131 ntBASIC2.93□□□□□ -1.94
COPB1P53618 RPL30P1-201ENST00000488676 339 ntBASIC2.93□□□□□ -1.94
COPB1P53618 SNORA40.14-201ENST00000516543 86 ntBASIC2.93□□□□□ -1.94
COPB1P53618 SNORD19.2-201ENST00000516978 73 ntBASIC2.93□□□□□ -1.94
COPB1P53618 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.93□□□□□ -1.94
COPB1P53618 MIR4635-201ENST00000583759 79 ntBASIC2.93□□□□□ -1.94
COPB1P53618 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.93□□□□□ -1.94
COPB1P53618 SNORA43.4-201ENST00000629559 138 ntBASIC2.93□□□□□ -1.94
COPB1P53618 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
COPB1P53618 Y_RNA.144-201ENST00000363521 113 ntBASIC2.92□□□□□ -1.94
COPB1P53618 MIR568-201ENST00000385036 95 ntBASIC2.92□□□□□ -1.94
COPB1P53618 SNORA12.2-201ENST00000391040 156 ntBASIC2.92□□□□□ -1.94
COPB1P53618 RNU6-700P-201ENST00000391043 107 ntBASIC2.92□□□□□ -1.94
COPB1P53618 MTCYBP2-201ENST00000407745 171 ntBASIC2.92□□□□□ -1.94
COPB1P53618 RNU6-1245P-201ENST00000411130 106 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms