Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CLCNKAP51800 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCNKAP51800 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCNKAP51800 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCNKAP51800 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLCNKAP51800 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 Y_RNA.460-201ENST00000384255 102 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 RNU6-43P-201ENST00000384302 107 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 Y_RNA.579-201ENST00000390939 94 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 RNU6-174P-201ENST00000410406 106 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AC007064.1-201ENST00000412238 351 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.52□□□□□ -2.01
CLCNKAP51800 AC138623.1-201ENST00000418060 216 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 BX276092.3-201ENST00000424182 230 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 Z98742.2-201ENST00000431564 187 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 RPL39P29-201ENST00000447779 157 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 AC114801.2-201ENST00000503825 781 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AC005741.1-201ENST00000511094 432 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 SCARNA16.2-201ENST00000516520 172 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.52□□□□□ -2.01
CLCNKAP51800 HMGB1P24-202ENST00000615653 685 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AL160413.1-201ENST00000622780 310 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 AC009541.1-201ENST00000438279 2662 ntBASIC2.52□□□□□ -2.01
CLCNKAP51800 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLCNKAP51800 Z82209.1-201ENST00000422141 2135 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 SNORD50.1-201ENST00000362987 71 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 U3.13-201ENST00000364804 214 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 RNU6-890P-201ENST00000384121 107 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 MIR592-201ENST00000384959 97 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 BTF3L4P2-201ENST00000392798 346 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 RNA5SP390-201ENST00000410191 113 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 RPS20P15-201ENST00000412792 311 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 USMG5P1-201ENST00000425964 177 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCNKAP51800 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCNKAP51800 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCNKAP51800 RNU6-120P-201ENST00000516077 103 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 RNA5SP148-201ENST00000516527 94 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
CLCNKAP51800 AL158827.2-201ENST00000602494 330 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 AL691447.3-201ENST00000635020 330 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLCNKAP51800 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.51□□□□□ -2.01
CLCNKAP51800 AL109809.4-201ENST00000603520 2185 ntBASIC2.51□□□□□ -2.01
CLCNKAP51800 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCNKAP51800 RNU6-212P-201ENST00000362642 104 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 Y_RNA.40-201ENST00000362645 93 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 Y_RNA.533-201ENST00000384596 114 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLCNKAP51800 AL591034.2-201ENST00000402839 359 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 MTND4P28-201ENST00000426217 387 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 EEF1B2P7-201ENST00000451177 676 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC079354.2-201ENST00000453523 154 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 RNU7-152P-201ENST00000458982 64 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 RPL36AP48-201ENST00000485521 314 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC097473.1-201ENST00000508142 408 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 RNU6-1153P-201ENST00000516760 105 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLCNKAP51800 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.5□□□□□ -2.01
CLCNKAP51800 CBX3P8-201ENST00000532412 525 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 MIR4273-201ENST00000582824 84 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC080078.3-201ENST00000605407 463 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 RNU6-91P-201ENST00000607774 107 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 uc_338.14-201ENST00000613162 166 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
CLCNKAP51800 CTSLP2-204ENST00000629029 392 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AC243829.7-201ENST00000633081 225 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
CLCNKAP51800 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
CLCNKAP51800 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLCNKAP51800 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLCNKAP51800 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCNKAP51800 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLCNKAP51800 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.49□□□□□ -2.01
CLCNKAP51800 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLCNKAP51800 MIR449A-201ENST00000362113 91 ntBASIC2.49□□□□□ -2.01
CLCNKAP51800 RNU6-529P-201ENST00000363383 104 ntBASIC2.49□□□□□ -2.01
CLCNKAP51800 SNORA67.1-201ENST00000364749 141 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms