Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
USP11P51784 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
USP11P51784 RNU6-142P-201ENST00000384019 107 ntBASIC4.06□□□□□ -1.76
USP11P51784 SNORD116-20-201ENST00000384529 92 ntBASIC4.06□□□□□ -1.76
USP11P51784 SNORD20-201ENST00000384550 80 ntBASIC4.06□□□□□ -1.76
USP11P51784 RNU6-140P-201ENST00000384566 108 ntBASIC4.06□□□□□ -1.76
USP11P51784 MIR325-201ENST00000385260 98 ntBASIC4.06□□□□□ -1.76
USP11P51784 RNU6-257P-201ENST00000410238 98 ntBASIC4.06□□□□□ -1.76
USP11P51784 RNU6-1199P-201ENST00000411249 104 ntBASIC4.06□□□□□ -1.76
USP11P51784 AL358075.3-201ENST00000426289 226 ntBASIC4.06□□□□□ -1.76
USP11P51784 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.06□□□□□ -1.76
USP11P51784 AC009237.8-201ENST00000445492 379 ntBASIC4.06□□□□□ -1.76
USP11P51784 AC005042.3-201ENST00000453230 174 ntBASIC4.06□□□□□ -1.76
USP11P51784 AP000705.1-201ENST00000454567 350 ntBASIC4.06□□□□□ -1.76
USP11P51784 RPS4XP22-201ENST00000480755 780 ntBASIC4.06□□□□□ -1.76
USP11P51784 AC023141.12-201ENST00000512399 199 ntBASIC4.06□□□□□ -1.76
USP11P51784 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.06□□□□□ -1.76
USP11P51784 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.06□□□□□ -1.76
USP11P51784 MIR7851-201ENST00000610611 160 ntBASIC4.06□□□□□ -1.76
USP11P51784 AC024581.2-201ENST00000619986 252 ntBASIC4.06□□□□□ -1.76
USP11P51784 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
USP11P51784 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.05□□□□□ -1.76
USP11P51784 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
USP11P51784 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 FTLP6-201ENST00000355274 422 ntBASIC4.05□□□□□ -1.76
USP11P51784 SNORD56.1-201ENST00000362913 68 ntBASIC4.05□□□□□ -1.76
USP11P51784 RNU1-140P-201ENST00000365040 165 ntBASIC4.05□□□□□ -1.76
USP11P51784 SNORA11.1-201ENST00000408133 129 ntBASIC4.05□□□□□ -1.76
USP11P51784 RNU2-2P-201ENST00000410396 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 Y_RNA.629-201ENST00000411368 105 ntBASIC4.05□□□□□ -1.76
USP11P51784 CRYBB2P1-203ENST00000415709 538 ntBASIC4.05□□□□□ -1.76
USP11P51784 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.05□□□□□ -1.76
USP11P51784 YME1L1P1-201ENST00000429435 297 ntBASIC4.05□□□□□ -1.76
USP11P51784 RBMY2UP-201ENST00000453474 324 ntBASIC4.05□□□□□ -1.76
USP11P51784 snoU13.6-201ENST00000458785 104 ntBASIC4.05□□□□□ -1.76
USP11P51784 AC097462.2-201ENST00000504623 481 ntBASIC4.05□□□□□ -1.76
USP11P51784 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.05□□□□□ -1.76
USP11P51784 RNU1-103P-201ENST00000516502 125 ntBASIC4.05□□□□□ -1.76
USP11P51784 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.05□□□□□ -1.76
USP11P51784 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 AC233702.2-202ENST00000562547 291 ntBASIC4.05□□□□□ -1.76
USP11P51784 RNU2-4P-201ENST00000606190 192 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.15-201ENST00000611544 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.16-201ENST00000613119 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.12-201ENST00000613778 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.9-201ENST00000615427 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.11-201ENST00000616345 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.2-201ENST00000616535 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.3-201ENST00000617785 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.19-201ENST00000618602 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 RNU2-1-201ENST00000618664 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.6-201ENST00000619225 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.5-201ENST00000619465 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 U2.10-201ENST00000620268 191 ntBASIC4.05□□□□□ -1.76
USP11P51784 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
USP11P51784 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.05□□□□□ -1.76
USP11P51784 AC110491.1-201ENST00000562191 2010 ntBASIC4.05□□□□□ -1.76
USP11P51784 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP11P51784 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.04□□□□□ -1.76
USP11P51784 AC118273.1-201ENST00000525324 3006 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNU6-778P-201ENST00000363269 103 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNU6-873P-201ENST00000363833 107 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNU4-84P-201ENST00000364200 139 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNA5SP387-201ENST00000364226 106 ntBASIC4.04□□□□□ -1.76
USP11P51784 Y_RNA.238-201ENST00000364441 102 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNU6-312P-201ENST00000364629 107 ntBASIC4.04□□□□□ -1.76
USP11P51784 MIR569-201ENST00000385228 96 ntBASIC4.04□□□□□ -1.76
USP11P51784 RNU6-1245P-201ENST00000411130 106 ntBASIC4.04□□□□□ -1.76
USP11P51784 AC074117.2-201ENST00000417130 397 ntBASIC4.04□□□□□ -1.76
USP11P51784 SEPT7P4-201ENST00000437076 306 ntBASIC4.04□□□□□ -1.76
USP11P51784 AC006026.2-201ENST00000457376 180 ntBASIC4.04□□□□□ -1.76
USP11P51784 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.04□□□□□ -1.76
USP11P51784 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.04□□□□□ -1.76
USP11P51784 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.04□□□□□ -1.76
USP11P51784 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.04□□□□□ -1.76
USP11P51784 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.04□□□□□ -1.76
USP11P51784 AL356157.2-201ENST00000605122 111 ntBASIC4.04□□□□□ -1.76
USP11P51784 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.04□□□□□ -1.76
USP11P51784 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP11P51784 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP11P51784 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
USP11P51784 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
USP11P51784 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
USP11P51784 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP11P51784 MFSD8-233ENST00000641482 4860 ntBASIC4.04□□□□□ -1.76
USP11P51784 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.03□□□□□ -1.76
USP11P51784 Y_RNA.7-201ENST00000362352 102 ntBASIC4.03□□□□□ -1.76
USP11P51784 RNU6-283P-201ENST00000364788 107 ntBASIC4.03□□□□□ -1.76
USP11P51784 MIR7-3-201ENST00000384898 110 ntBASIC4.03□□□□□ -1.76
USP11P51784 RNA5SP129-201ENST00000410276 118 ntBASIC4.03□□□□□ -1.76
USP11P51784 SNRPGP7-201ENST00000469016 106 ntBASIC4.03□□□□□ -1.76
USP11P51784 RN7SL594P-201ENST00000470590 287 ntBASIC4.03□□□□□ -1.76
USP11P51784 AC110768.1-201ENST00000509222 400 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms