Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF144AP50876 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.14□□□□□ -1.75
RNF144AP50876 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNF144AP50876 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNF144AP50876 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF144AP50876 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RNF144AP50876 SNORD114-7-201ENST00000362520 77 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 RNU6-1010P-201ENST00000362757 107 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 SNORD114-19-201ENST00000363072 75 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 Y_RNA.116-201ENST00000363292 103 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 RNU6-978P-201ENST00000364371 103 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF144AP50876 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 SNRPGP5-201ENST00000456003 220 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 AL441985.1-201ENST00000457727 251 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 Y_RNA.649-201ENST00000459077 103 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 snoU13.14-201ENST00000459372 104 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 RPS29P22-201ENST00000472363 168 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 AC015795.1-201ENST00000513669 327 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 Vault.1-201ENST00000516474 102 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 Y_RNA.690-201ENST00000516603 95 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.13□□□□□ -1.75
RNF144AP50876 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF144AP50876 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RNF144AP50876 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF144AP50876 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RNF144AP50876 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RNF144AP50876 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNF144AP50876 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.13□□□□□ -1.75
RNF144AP50876 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
RNF144AP50876 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF144AP50876 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF144AP50876 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF144AP50876 RNU4-41P-201ENST00000364426 143 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 Y_RNA.346-201ENST00000365385 112 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU6-1323P-201ENST00000384025 107 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 SNORD116-13-201ENST00000384408 92 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU6-748P-201ENST00000384648 107 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNF144AP50876 RNA5SP332-201ENST00000391063 115 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 MIR873-201ENST00000401120 77 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 Y_RNA.617-201ENST00000410920 90 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU2-55P-201ENST00000411146 174 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RPL23AP82-202ENST00000427528 469 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AL445584.1-201ENST00000431451 330 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC006028.1-201ENST00000438379 402 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RPL23AP7-203ENST00000449021 469 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU6-437P-201ENST00000459408 95 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 CENPBD1P1-201ENST00000464061 469 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RPS26P45-201ENST00000471748 340 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC023141.12-201ENST00000512399 199 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU6-1299P-201ENST00000516316 100 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF144AP50876 AC091152.3-201ENST00000604227 325 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 RNU6-91P-201ENST00000607774 107 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC069200.1-201ENST00000609511 323 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 AC112484.5-201ENST00000624189 228 ntBASIC4.12□□□□□ -1.75
RNF144AP50876 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF144AP50876 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF144AP50876 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF144AP50876 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 CPHL1P-201ENST00000461341 3407 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 AC007256.1-201ENST00000392253 2765 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 SNORD113.2-201ENST00000364166 89 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RNVU1-6-201ENST00000364688 164 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RNA5SP397-201ENST00000391323 118 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 AL603914.1-201ENST00000401964 204 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RPS16P5-201ENST00000406501 404 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RN7SKP101-201ENST00000411376 320 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF144AP50876 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF144AP50876 RPS3P1-201ENST00000456781 192 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RPL23AP62-201ENST00000463396 453 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 AC090515.1-201ENST00000465295 476 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF144AP50876 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF144AP50876 RNU6-781P-201ENST00000516377 101 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 RNU7-116P-201ENST00000516940 62 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 IGLV3-26-201ENST00000520756 302 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 AC069240.1-201ENST00000548774 375 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 MIR6820-201ENST00000611508 62 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 uc_338.28-201ENST00000612082 187 ntBASIC4.11□□□□□ -1.75
RNF144AP50876 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RNF144AP50876 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF144AP50876 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RNF144AP50876 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF144AP50876 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF144AP50876 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms