Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MTATP8P1-201ENST00000467115 207 ntBASIC2.67□□□□□ -1.98
SOX2P48431 RPL21P129-201ENST00000491732 478 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AC006445.1-201ENST00000491925 405 ntBASIC2.67□□□□□ -1.98
SOX2P48431 HMGB1P35-201ENST00000503360 598 ntBASIC2.67□□□□□ -1.98
SOX2P48431 SNORA31.6-201ENST00000516241 130 ntBASIC2.67□□□□□ -1.98
SOX2P48431 RNU6-1198P-201ENST00000516904 67 ntBASIC2.67□□□□□ -1.98
SOX2P48431 Y_RNA.715-201ENST00000517082 110 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.67□□□□□ -1.98
SOX2P48431 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX2P48431 MIR4765-201ENST00000585007 77 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AC011471.1-201ENST00000585766 187 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AL078605.1-201ENST00000603529 500 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
SOX2P48431 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SOX2P48431 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX2P48431 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SOX2P48431 Z75746.1-201ENST00000440243 2080 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RNU6-222P-201ENST00000362438 107 ntBASIC2.66□□□□□ -1.98
SOX2P48431 Y_RNA.40-201ENST00000362645 93 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RNU6-655P-201ENST00000362858 107 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RNU6-137P-201ENST00000363680 108 ntBASIC2.66□□□□□ -1.98
SOX2P48431 U8.10-201ENST00000384260 133 ntBASIC2.66□□□□□ -1.98
SOX2P48431 MIR23B-201ENST00000384832 97 ntBASIC2.66□□□□□ -1.98
SOX2P48431 MIR134-201ENST00000385258 73 ntBASIC2.66□□□□□ -1.98
SOX2P48431 SNORA48.7-201ENST00000391302 135 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RPL21P75-201ENST00000396599 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SOX2P48431 RPL21P28-201ENST00000401418 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 MIR548F4-201ENST00000408515 105 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC097463.2-201ENST00000421074 142 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AL590556.1-201ENST00000423231 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RPL21P39-201ENST00000463605 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC087190.1-201ENST00000484462 480 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC107032.1-201ENST00000485945 480 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC132942.1-201ENST00000486753 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC093591.1-201ENST00000491435 481 ntBASIC2.66□□□□□ -1.98
SOX2P48431 RPL21P16-201ENST00000495531 483 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.66□□□□□ -1.98
SOX2P48431 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.66□□□□□ -1.98
SOX2P48431 AL442163.3-201ENST00000554110 156 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC008269.2-201ENST00000561915 1105 ntBASIC2.66□□□□□ -1.98
SOX2P48431 CYP4A27P-201ENST00000567218 190 ntBASIC2.66□□□□□ -1.98
SOX2P48431 MIR3923-201ENST00000579521 83 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.66□□□□□ -1.98
SOX2P48431 AL390123.1-201ENST00000603216 237 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AL034555.1-201ENST00000604816 211 ntBASIC2.66□□□□□ -1.98
SOX2P48431 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.66□□□□□ -1.98
SOX2P48431 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.66□□□□□ -1.98
SOX2P48431 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.65□□□□□ -1.98
SOX2P48431 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.65□□□□□ -1.98
SOX2P48431 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.65□□□□□ -1.98
SOX2P48431 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SOX2P48431 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.65□□□□□ -1.98
SOX2P48431 OR56A5-201ENST00000340110 738 ntBASIC2.65□□□□□ -1.99
SOX2P48431 Y_RNA.27-201ENST00000362540 103 ntBASIC2.65□□□□□ -1.99
SOX2P48431 Y_RNA.144-201ENST00000363521 113 ntBASIC2.65□□□□□ -1.99
SOX2P48431 RNU6-1210P-201ENST00000363775 107 ntBASIC2.65□□□□□ -1.99
SOX2P48431 Y_RNA.551-201ENST00000384661 102 ntBASIC2.65□□□□□ -1.99
SOX2P48431 SNORD15B-201ENST00000384714 146 ntBASIC2.65□□□□□ -1.99
SOX2P48431 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.65□□□□□ -1.99
SOX2P48431 AL357075.1-201ENST00000404107 726 ntBASIC2.65□□□□□ -1.99
SOX2P48431 RPS26P42-201ENST00000413485 326 ntBASIC2.65□□□□□ -1.99
SOX2P48431 AIMP1P2-201ENST00000425294 312 ntBASIC2.65□□□□□ -1.99
SOX2P48431 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.65□□□□□ -1.99
SOX2P48431 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SOX2P48431 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.65□□□□□ -1.99
SOX2P48431 AP000870.1-201ENST00000472927 406 ntBASIC2.65□□□□□ -1.99
SOX2P48431 RPL31P41-201ENST00000477967 372 ntBASIC2.65□□□□□ -1.99
SOX2P48431 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.65□□□□□ -1.99
SOX2P48431 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.65□□□□□ -1.99
SOX2P48431 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.65□□□□□ -1.99
SOX2P48431 RNA5SP112-201ENST00000515937 99 ntBASIC2.65□□□□□ -1.99
SOX2P48431 RNU6-1114P-201ENST00000516022 107 ntBASIC2.65□□□□□ -1.99
SOX2P48431 SCARNA17.1-201ENST00000516211 143 ntBASIC2.65□□□□□ -1.99
SOX2P48431 SCARNA17.2-201ENST00000516334 143 ntBASIC2.65□□□□□ -1.99
SOX2P48431 AC022868.1-201ENST00000517767 391 ntBASIC2.65□□□□□ -1.99
SOX2P48431 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.65□□□□□ -1.99
SOX2P48431 AC008739.2-201ENST00000597006 317 ntBASIC2.65□□□□□ -1.99
SOX2P48431 PRR13P7-201ENST00000605538 430 ntBASIC2.65□□□□□ -1.99
SOX2P48431 AL021879.1-201ENST00000611756 288 ntBASIC2.65□□□□□ -1.99
SOX2P48431 SCARNA17.4-201ENST00000614296 143 ntBASIC2.65□□□□□ -1.99
SOX2P48431 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.65□□□□□ -1.99
SOX2P48431 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.65□□□□□ -1.99
SOX2P48431 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.65□□□□□ -1.99
SOX2P48431 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SOX2P48431 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SOX2P48431 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SOX2P48431 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SOX2P48431 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SOX2P48431 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SOX2P48431 AP003122.5-201ENST00000527668 3766 ntBASIC2.64□□□□□ -1.99
SOX2P48431 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SOX2P48431 RNU1-76P-201ENST00000362903 159 ntBASIC2.64□□□□□ -1.99
SOX2P48431 Y_RNA.149-201ENST00000363558 117 ntBASIC2.64□□□□□ -1.99
SOX2P48431 Y_RNA.176-201ENST00000363815 109 ntBASIC2.64□□□□□ -1.99
SOX2P48431 RNU1-139P-201ENST00000391307 165 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.64□□□□□ -1.99
SOX2P48431 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.64□□□□□ -1.99
SOX2P48431 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms