Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.44□□□□□ -2.18
TNFSF9P41273 MTND1P15-201ENST00000579262 949 ntBASIC1.44□□□□□ -2.18
TNFSF9P41273 AC008752.3-201ENST00000588113 712 ntBASIC1.44□□□□□ -2.18
TNFSF9P41273 AL391646.1-201ENST00000603860 190 ntBASIC1.44□□□□□ -2.18
TNFSF9P41273 AP000654.2-201ENST00000605633 586 ntBASIC1.44□□□□□ -2.18
TNFSF9P41273 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TNFSF9P41273 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TNFSF9P41273 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.43□□□□□ -2.18
TNFSF9P41273 CBX3P1-201ENST00000325243 554 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RNA5SP493-201ENST00000364115 91 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RNU6-203P-201ENST00000384038 104 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RNU6-456P-201ENST00000384493 107 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RNU6-1222P-201ENST00000384615 107 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 Y_RNA.553-201ENST00000384670 102 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 SNORA48.1-201ENST00000390879 135 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RNU6-1245P-201ENST00000411130 106 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFSF9P41273 OR6C66P-201ENST00000414917 930 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 C1DP4-201ENST00000455429 424 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 TOMM22P6-201ENST00000465035 409 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC132942.1-201ENST00000486753 483 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC010424.1-201ENST00000506336 297 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.43□□□□□ -2.18
TNFSF9P41273 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFSF9P41273 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC074344.1-201ENST00000512823 224 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 SNORD27.1-201ENST00000516319 72 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.43□□□□□ -2.18
TNFSF9P41273 AL590229.1-201ENST00000603497 542 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC104073.3-201ENST00000610942 955 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 RMST_4.1-201ENST00000616886 107 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 U6.114-201ENST00000636407 96 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 ELL2P3-201ENST00000457883 1602 ntBASIC1.43□□□□□ -2.18
TNFSF9P41273 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TNFSF9P41273 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 Y_RNA.269-201ENST00000364685 89 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 RNU6-715P-201ENST00000365204 103 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TNFSF9P41273 SNORD116-1-201ENST00000384335 95 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 RNA5SP100-201ENST00000410903 110 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 RNA5SP59-201ENST00000410922 110 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.42□□□□□ -2.18
TNFSF9P41273 USP9YP14-201ENST00000430663 563 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 GPR143P-201ENST00000434155 205 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.42□□□□□ -2.18
TNFSF9P41273 AL035666.1-201ENST00000446195 348 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC132479.1-201ENST00000449160 144 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.42□□□□□ -2.18
TNFSF9P41273 FO393415.2-201ENST00000480085 343 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 HMGN1P7-201ENST00000491722 313 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 ARL2BPP4-201ENST00000506854 471 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC079140.3-201ENST00000511111 550 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 RNU6-1178P-201ENST00000516674 107 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFSF9P41273 AC084364.2-201ENST00000546924 395 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.42□□□□□ -2.18
TNFSF9P41273 TRAV32-201ENST00000553993 340 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFSF9P41273 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 MTATP6P3-201ENST00000581686 676 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AL590240.4-201ENST00000616908 390 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 MIR7111-201ENST00000619751 72 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 AC091895.1-201ENST00000624494 256 ntBASIC1.42□□□□□ -2.18
TNFSF9P41273 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.41□□□□□ -2.18
TNFSF9P41273 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TNFSF9P41273 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF9P41273 RNU6-45P-201ENST00000384471 107 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 SNORA16.2-201ENST00000390991 127 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 SNORA12-201ENST00000391162 147 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AL357139.1-201ENST00000407792 426 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 RNU6-607P-201ENST00000411283 108 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.41□□□□□ -2.18
TNFSF9P41273 NCOR1P3-201ENST00000420479 303 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 MTCYBP8-201ENST00000422855 651 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TNFSF9P41273 MTND1P18-201ENST00000448191 573 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 Y_RNA.688-201ENST00000516565 95 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 RNA5SP490-201ENST00000517141 136 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AC115990.1-201ENST00000526957 301 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 SUB1P2-201ENST00000556401 297 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF9P41273 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AC087752.4-201ENST00000605911 462 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AC090582.1-201ENST00000636321 199 ntBASIC1.41□□□□□ -2.18
TNFSF9P41273 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.41□□□□□ -2.18
TNFSF9P41273 AL390237.1-201ENST00000404226 1415 ntBASIC1.4□□□□□ -2.18
TNFSF9P41273 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms