Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU4-62P-201ENST00000410125 130 ntBASIC1.55□□□□□ -2.16
RORAP35398 AL353193.1-201ENST00000421444 268 ntBASIC1.55□□□□□ -2.16
RORAP35398 MTCYBP8-201ENST00000422855 651 ntBASIC1.55□□□□□ -2.16
RORAP35398 MTCO2P19-201ENST00000427513 598 ntBASIC1.55□□□□□ -2.16
RORAP35398 AC010975.2-201ENST00000427781 588 ntBASIC1.55□□□□□ -2.16
RORAP35398 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.55□□□□□ -2.16
RORAP35398 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.55□□□□□ -2.16
RORAP35398 RNU7-180P-201ENST00000459240 63 ntBASIC1.55□□□□□ -2.16
RORAP35398 CCDC34P1-201ENST00000507441 517 ntBASIC1.55□□□□□ -2.16
RORAP35398 AC105417.1-201ENST00000514691 285 ntBASIC1.55□□□□□ -2.16
RORAP35398 MIR449C-201ENST00000516047 92 ntBASIC1.55□□□□□ -2.16
RORAP35398 AL137161.1-201ENST00000532231 390 ntBASIC1.55□□□□□ -2.16
RORAP35398 HIF1AP1-201ENST00000553642 175 ntBASIC1.55□□□□□ -2.16
RORAP35398 VN1R80P-201ENST00000597126 338 ntBASIC1.55□□□□□ -2.16
RORAP35398 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
RORAP35398 Z99497.2-201ENST00000603634 310 ntBASIC1.55□□□□□ -2.16
RORAP35398 AL022345.1-201ENST00000607292 135 ntBASIC1.55□□□□□ -2.16
RORAP35398 AC009509.4-201ENST00000619202 509 ntBASIC1.55□□□□□ -2.16
RORAP35398 SNORD98-201ENST00000636377 67 ntBASIC1.55□□□□□ -2.16
RORAP35398 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RORAP35398 WWP1P1-201ENST00000466609 2769 ntBASIC1.54□□□□□ -2.16
RORAP35398 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.54□□□□□ -2.16
RORAP35398 MIR378A-201ENST00000362177 66 ntBASIC1.54□□□□□ -2.16
RORAP35398 Y_RNA.99-201ENST00000363138 105 ntBASIC1.54□□□□□ -2.16
RORAP35398 RNU6-1141P-201ENST00000364520 107 ntBASIC1.54□□□□□ -2.16
RORAP35398 RNU6-827P-201ENST00000365553 106 ntBASIC1.54□□□□□ -2.16
RORAP35398 RNU6-1103P-201ENST00000384150 107 ntBASIC1.54□□□□□ -2.16
RORAP35398 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
RORAP35398 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.54□□□□□ -2.16
RORAP35398 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.54□□□□□ -2.16
RORAP35398 BTF3P4-201ENST00000418852 495 ntBASIC1.54□□□□□ -2.16
RORAP35398 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.54□□□□□ -2.16
RORAP35398 MTCO1P19-201ENST00000443487 500 ntBASIC1.54□□□□□ -2.16
RORAP35398 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC073415.1-201ENST00000449240 153 ntBASIC1.54□□□□□ -2.16
RORAP35398 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
RORAP35398 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.54□□□□□ -2.16
RORAP35398 AC145146.1-201ENST00000496370 254 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC098862.1-201ENST00000504991 413 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.54□□□□□ -2.16
RORAP35398 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.54□□□□□ -2.16
RORAP35398 AC091874.1-201ENST00000511402 339 ntBASIC1.54□□□□□ -2.16
RORAP35398 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.54□□□□□ -2.16
RORAP35398 MTND3P5-201ENST00000512798 333 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC103996.1-201ENST00000555468 102 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.54□□□□□ -2.16
RORAP35398 AC119751.7-201ENST00000600494 245 ntBASIC1.54□□□□□ -2.16
RORAP35398 AC107304.1-201ENST00000604229 296 ntBASIC1.54□□□□□ -2.16
RORAP35398 AP000654.2-201ENST00000605633 586 ntBASIC1.54□□□□□ -2.16
RORAP35398 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
RORAP35398 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RORAP35398 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.54□□□□□ -2.16
RORAP35398 AL450472.1-202ENST00000637286 180 ntBASIC1.54□□□□□ -2.16
RORAP35398 MTND4P23-201ENST00000447723 1363 ntBASIC1.54□□□□□ -2.16
RORAP35398 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
RORAP35398 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
RORAP35398 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
RORAP35398 Y_RNA.381-201ENST00000365666 102 ntBASIC1.53□□□□□ -2.16
RORAP35398 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.53□□□□□ -2.16
RORAP35398 AC009310.1-201ENST00000414414 451 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.53□□□□□ -2.16
RORAP35398 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.53□□□□□ -2.16
RORAP35398 RPL23AP95-201ENST00000426806 265 ntBASIC1.53□□□□□ -2.16
RORAP35398 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.53□□□□□ -2.16
RORAP35398 AL031274.1-201ENST00000450334 232 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.53□□□□□ -2.16
RORAP35398 RNU6-956P-201ENST00000458868 103 ntBASIC1.53□□□□□ -2.16
RORAP35398 RNU7-167P-201ENST00000459160 62 ntBASIC1.53□□□□□ -2.16
RORAP35398 SNRPGP7-201ENST00000469016 106 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC079140.5-201ENST00000507882 310 ntBASIC1.53□□□□□ -2.16
RORAP35398 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.53□□□□□ -2.16
RORAP35398 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.53□□□□□ -2.16
RORAP35398 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
RORAP35398 RSL24D1P11-201ENST00000591045 491 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC110760.3-201ENST00000598794 467 ntBASIC1.53□□□□□ -2.16
RORAP35398 VN1R107P-201ENST00000601784 209 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC091805.2-201ENST00000603848 235 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC016925.2-201ENST00000605108 242 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC008536.2-201ENST00000607284 349 ntBASIC1.53□□□□□ -2.16
RORAP35398 AC078883.4-201ENST00000623218 367 ntBASIC1.53□□□□□ -2.16
RORAP35398 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
RORAP35398 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RORAP35398 AP000560.1-201ENST00000624150 1937 ntBASIC1.52□□□□□ -2.17
RORAP35398 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
RORAP35398 RNU6-517P-201ENST00000384362 110 ntBASIC1.52□□□□□ -2.17
RORAP35398 Y_RNA.553-201ENST00000384670 102 ntBASIC1.52□□□□□ -2.17
RORAP35398 SNORA26.3-201ENST00000391119 136 ntBASIC1.52□□□□□ -2.17
RORAP35398 RNU6-1158P-201ENST00000391167 107 ntBASIC1.52□□□□□ -2.17
RORAP35398 RNA5SP201-201ENST00000410316 124 ntBASIC1.52□□□□□ -2.17
RORAP35398 RPL23AP36-201ENST00000413895 458 ntBASIC1.52□□□□□ -2.17
RORAP35398 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
RORAP35398 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.52□□□□□ -2.17
RORAP35398 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.52□□□□□ -2.17
RORAP35398 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.52□□□□□ -2.17
RORAP35398 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.52□□□□□ -2.17
RORAP35398 AC244670.1-201ENST00000436879 112 ntBASIC1.52□□□□□ -2.17
RORAP35398 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
RORAP35398 SNRPFP3-201ENST00000457792 225 ntBASIC1.52□□□□□ -2.17
RORAP35398 TPT1P7-201ENST00000458300 517 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms