Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU6-623P-201ENST00000363143 105 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNU6-266P-201ENST00000364225 107 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNU6-1322P-201ENST00000364309 107 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNU6-38P-201ENST00000384085 107 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNA5SP450-201ENST00000411206 102 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 OR9R1P-201ENST00000412200 877 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 VN1R36P-201ENST00000414936 291 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA9P31269 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.68□□□□□ -2.14
HOXA9P31269 AC007969.2-201ENST00000441891 191 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 MTND1P1-201ENST00000445453 368 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA9P31269 RNU6-333P-201ENST00000459117 107 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNU7-167P-201ENST00000459160 62 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 HMGB1P35-201ENST00000503360 598 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA9P31269 RNA5SP401-201ENST00000515920 127 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 RNU6-1038P-201ENST00000516516 104 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 Y_RNA.693-201ENST00000516641 110 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC023050.3-201ENST00000541142 333 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC090115.3-201ENST00000553218 849 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXA9P31269 AL118558.2-201ENST00000556294 238 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC245505.1-201ENST00000556398 224 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 uc_338.34-201ENST00000617467 174 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 MTND4P14-201ENST00000435799 1354 ntBASIC1.68□□□□□ -2.14
HOXA9P31269 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
HOXA9P31269 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXA9P31269 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA9P31269 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA9P31269 RNU6-1010P-201ENST00000362757 107 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 SNORD114-19-201ENST00000363072 75 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 RNU6-1085P-201ENST00000363576 107 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 RNU5E-7P-201ENST00000365290 117 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 Y_RNA.372-201ENST00000365599 102 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 RNU4-20P-201ENST00000365601 151 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 Y_RNA.480-201ENST00000384364 102 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 MIR186-201ENST00000384988 86 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 RNU6-648P-201ENST00000410190 107 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 RN7SKP101-201ENST00000411376 320 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AP000275.1-201ENST00000411943 390 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXA9P31269 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HOXA9P31269 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXA9P31269 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA9P31269 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXA9P31269 MTCO3P38-201ENST00000468910 766 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.67□□□□□ -2.14
HOXA9P31269 MTND4P7-201ENST00000523876 130 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.67□□□□□ -2.14
HOXA9P31269 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.67□□□□□ -2.14
HOXA9P31269 AL713866.2-201ENST00000603579 219 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AL645939.4-201ENST00000604495 135 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC064807.4-201ENST00000607201 407 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC096772.1-201ENST00000609146 564 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 uc_338.5-201ENST00000611839 155 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC015540.1-201ENST00000615828 501 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 AC097372.5-201ENST00000623665 376 ntBASIC1.67□□□□□ -2.14
HOXA9P31269 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HOXA9P31269 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HOXA9P31269 RNU6-428P-201ENST00000362942 107 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RNU6-105P-201ENST00000363909 104 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXA9P31269 RNU6-483P-201ENST00000384088 108 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RNU6-1032P-201ENST00000384100 107 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RNU1-57P-201ENST00000384491 166 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AL606923.1-201ENST00000406616 190 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RNA5SP390-201ENST00000410191 113 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.66□□□□□ -2.14
HOXA9P31269 AC138623.1-201ENST00000418060 216 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.66□□□□□ -2.14
HOXA9P31269 C8orf59P1-201ENST00000429930 303 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AL365400.1-201ENST00000431854 640 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXA9P31269 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.66□□□□□ -2.14
HOXA9P31269 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AC013470.1-201ENST00000453438 462 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AMD1P1-201ENST00000457220 922 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 TPTE2P5-203ENST00000458118 728 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 RPL30P12-201ENST00000474666 353 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 Y_RNA.704-201ENST00000516851 102 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HOXA9P31269 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AL512360.1-201ENST00000555346 234 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AL159153.1-201ENST00000619688 317 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AC073534.2-201ENST00000620377 381 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 AC099654.12-201ENST00000639868 649 ntBASIC1.66□□□□□ -2.14
HOXA9P31269 Y_RNA.167-201ENST00000363735 109 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 Y_RNA.378-201ENST00000365652 113 ntBASIC1.65□□□□□ -2.15
HOXA9P31269 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXA9P31269 Y_RNA.481-201ENST00000384373 102 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms