Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC090517.1-201ENST00000569307 266 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 AC004584.2-201ENST00000570407 410 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 SNRPGP20-201ENST00000604477 205 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 AC007179.3-201ENST00000604976 235 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 AC073476.4-201ENST00000628409 72 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 AC008264.2-201ENST00000610193 3731 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TNFSF4P23510 AC073544.1-201ENST00000600110 1595 ntBASIC2.74□□□□□ -1.97
TNFSF4P23510 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TNFSF4P23510 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFSF4P23510 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFSF4P23510 RNU1-70P-201ENST00000362618 164 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 RNU6-490P-201ENST00000362985 107 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 RNU6-541P-201ENST00000384709 110 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 Y_RNA.577-201ENST00000384794 101 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFSF4P23510 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFSF4P23510 RN7SL863P-201ENST00000462370 296 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TNFSF4P23510 SNORA64.4-201ENST00000516632 81 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 MIR2276-201ENST00000516886 89 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.73□□□□□ -1.97
TNFSF4P23510 MIR4658-201ENST00000584344 65 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.73□□□□□ -1.97
TNFSF4P23510 AC096577.2-201ENST00000611455 153 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TNFSF4P23510 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
TNFSF4P23510 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFSF4P23510 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 BX322639.1-202ENST00000423987 2213 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TNFSF4P23510 RNU5F-3P-201ENST00000363767 117 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 MIR190B-201ENST00000401119 79 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AL357075.1-201ENST00000404107 726 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 RPS20P15-201ENST00000412792 311 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 RPS3AP12-201ENST00000443616 753 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFSF4P23510 TOMM22P6-201ENST00000465035 409 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC018868.1-201ENST00000491307 315 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFSF4P23510 RNA5SP217-201ENST00000515959 91 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 RNU6-1170P-201ENST00000515974 106 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 RNU6-58P-201ENST00000517143 103 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC245166.1-201ENST00000521012 253 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.72□□□□□ -1.97
TNFSF4P23510 MIR5195-201ENST00000583555 115 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC016727.2-201ENST00000603988 621 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC080078.3-201ENST00000605407 463 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AL050343.2-201ENST00000607338 280 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AL355802.3-201ENST00000607571 545 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 uc_338.25-201ENST00000613756 156 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC005562.2-201ENST00000618264 111 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 AC090574.1-201ENST00000623186 233 ntBASIC2.72□□□□□ -1.97
TNFSF4P23510 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
TNFSF4P23510 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TNFSF4P23510 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
TNFSF4P23510 RNU6-611P-201ENST00000384276 104 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 SNORD15B-201ENST00000384714 146 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 MIR625-201ENST00000385047 85 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 RNA5SP229-201ENST00000410809 99 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFSF4P23510 AC244505.4-201ENST00000434905 287 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 SSXP5-201ENST00000443473 287 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.71□□□□□ -1.98
TNFSF4P23510 AL035666.1-201ENST00000446195 348 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 HMGN1P13-201ENST00000505795 138 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 RNU6-965P-201ENST00000516721 96 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 SNORA70.24-201ENST00000517233 118 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 AC027288.2-201ENST00000553028 243 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TNFSF4P23510 MIR7112-201ENST00000616126 65 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 AC018692.3-201ENST00000623929 123 ntBASIC2.71□□□□□ -1.98
TNFSF4P23510 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.71□□□□□ -1.98
TNFSF4P23510 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TNFSF4P23510 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.71□□□□□ -1.98
TNFSF4P23510 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TNFSF4P23510 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFSF4P23510 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TNFSF4P23510 Y_RNA.11-201ENST00000362375 109 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 RNU6-99P-201ENST00000364721 107 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 RNU6-234P-201ENST00000365229 104 ntBASIC2.7□□□□□ -1.98
TNFSF4P23510 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms