Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
XPAP23025 RNU1-76P-201ENST00000362903 159 ntBASIC3.29□□□□□ -1.88
XPAP23025 RNU6-770P-201ENST00000363929 105 ntBASIC3.29□□□□□ -1.88
XPAP23025 MT-TW-201ENST00000387382 68 ntBASIC3.29□□□□□ -1.88
XPAP23025 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
XPAP23025 RNU6-121P-201ENST00000410525 99 ntBASIC3.29□□□□□ -1.88
XPAP23025 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.29□□□□□ -1.88
XPAP23025 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
XPAP23025 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
XPAP23025 AC107626.1-201ENST00000471084 183 ntBASIC3.29□□□□□ -1.88
XPAP23025 AC016632.1-201ENST00000503994 196 ntBASIC3.29□□□□□ -1.88
XPAP23025 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
XPAP23025 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
XPAP23025 AC027288.2-201ENST00000553028 243 ntBASIC3.29□□□□□ -1.88
XPAP23025 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
XPAP23025 AL353743.1-202ENST00000431724 1695 ntBASIC3.29□□□□□ -1.88
XPAP23025 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.29□□□□□ -1.88
XPAP23025 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
XPAP23025 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
XPAP23025 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
XPAP23025 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
XPAP23025 Y_RNA.19-201ENST00000362462 99 ntBASIC3.28□□□□□ -1.88
XPAP23025 Y_RNA.40-201ENST00000362645 93 ntBASIC3.28□□□□□ -1.88
XPAP23025 RNU6-1301P-201ENST00000362724 104 ntBASIC3.28□□□□□ -1.88
XPAP23025 RNU6-529P-201ENST00000363383 104 ntBASIC3.28□□□□□ -1.88
XPAP23025 Y_RNA.276-201ENST00000364732 109 ntBASIC3.28□□□□□ -1.88
XPAP23025 RNU6-748P-201ENST00000384648 107 ntBASIC3.28□□□□□ -1.88
XPAP23025 MIR491-201ENST00000384877 84 ntBASIC3.28□□□□□ -1.88
XPAP23025 RNA5SP213-201ENST00000391031 106 ntBASIC3.28□□□□□ -1.88
XPAP23025 UBA52P6-201ENST00000399822 382 ntBASIC3.28□□□□□ -1.88
XPAP23025 AL357075.1-201ENST00000404107 726 ntBASIC3.28□□□□□ -1.88
XPAP23025 AL358075.3-201ENST00000426289 226 ntBASIC3.28□□□□□ -1.88
XPAP23025 AC078809.1-201ENST00000427601 140 ntBASIC3.28□□□□□ -1.88
XPAP23025 CBX3P6-201ENST00000430257 527 ntBASIC3.28□□□□□ -1.88
XPAP23025 USP9YP16-201ENST00000430287 407 ntBASIC3.28□□□□□ -1.88
XPAP23025 USP9YP23-201ENST00000455085 407 ntBASIC3.28□□□□□ -1.88
XPAP23025 Y_RNA.668-201ENST00000516233 93 ntBASIC3.28□□□□□ -1.88
XPAP23025 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
XPAP23025 UBL5P4-201ENST00000562584 236 ntBASIC3.28□□□□□ -1.88
XPAP23025 AC025281.1-201ENST00000567026 265 ntBASIC3.28□□□□□ -1.88
XPAP23025 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.28□□□□□ -1.88
XPAP23025 MIR4425-201ENST00000580572 84 ntBASIC3.28□□□□□ -1.88
XPAP23025 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.28□□□□□ -1.88
XPAP23025 MIR7112-201ENST00000616126 65 ntBASIC3.28□□□□□ -1.88
XPAP23025 AC002064.3-201ENST00000623448 346 ntBASIC3.28□□□□□ -1.88
XPAP23025 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.27□□□□□ -1.89
XPAP23025 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
XPAP23025 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
XPAP23025 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
XPAP23025 SNORD21-201ENST00000383953 95 ntBASIC3.27□□□□□ -1.89
XPAP23025 RNU6-318P-201ENST00000384283 103 ntBASIC3.27□□□□□ -1.89
XPAP23025 Y_RNA.483-201ENST00000384380 101 ntBASIC3.27□□□□□ -1.89
XPAP23025 RNY3P4-201ENST00000384428 101 ntBASIC3.27□□□□□ -1.89
XPAP23025 MIR153-2-201ENST00000385225 87 ntBASIC3.27□□□□□ -1.89
XPAP23025 SNORA26.3-201ENST00000391119 136 ntBASIC3.27□□□□□ -1.89
XPAP23025 EIF1P2-201ENST00000428233 350 ntBASIC3.27□□□□□ -1.89
XPAP23025 RPS4XP2-201ENST00000458402 793 ntBASIC3.27□□□□□ -1.89
XPAP23025 LINC01399-202ENST00000458450 244 ntBASIC3.27□□□□□ -1.89
XPAP23025 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
XPAP23025 AC098869.1-201ENST00000481627 292 ntBASIC3.27□□□□□ -1.89
XPAP23025 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
XPAP23025 AC067942.3-201ENST00000512025 362 ntBASIC3.27□□□□□ -1.89
XPAP23025 SNORA40.15-201ENST00000516884 107 ntBASIC3.27□□□□□ -1.89
XPAP23025 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
XPAP23025 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.27□□□□□ -1.89
XPAP23025 RPS15AP11-201ENST00000594193 385 ntBASIC3.27□□□□□ -1.89
XPAP23025 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.27□□□□□ -1.89
XPAP23025 AC010620.2-201ENST00000600135 313 ntBASIC3.27□□□□□ -1.89
XPAP23025 AL391813.1-201ENST00000603098 260 ntBASIC3.27□□□□□ -1.89
XPAP23025 AL355877.2-201ENST00000603670 358 ntBASIC3.27□□□□□ -1.89
XPAP23025 AL161756.2-201ENST00000604597 246 ntBASIC3.27□□□□□ -1.89
XPAP23025 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.27□□□□□ -1.89
XPAP23025 AC011476.5-201ENST00000615594 130 ntBASIC3.27□□□□□ -1.89
XPAP23025 UCA1.1-201ENST00000620952 75 ntBASIC3.27□□□□□ -1.89
XPAP23025 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
XPAP23025 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
XPAP23025 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
XPAP23025 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
XPAP23025 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
XPAP23025 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
XPAP23025 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.26□□□□□ -1.89
XPAP23025 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.26□□□□□ -1.89
XPAP23025 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
XPAP23025 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
XPAP23025 Y_RNA.376-201ENST00000365638 108 ntBASIC3.26□□□□□ -1.89
XPAP23025 RNU6-611P-201ENST00000384276 104 ntBASIC3.26□□□□□ -1.89
XPAP23025 RNU6-713P-201ENST00000384761 107 ntBASIC3.26□□□□□ -1.89
XPAP23025 MIR549A-201ENST00000385268 96 ntBASIC3.26□□□□□ -1.89
XPAP23025 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.26□□□□□ -1.89
XPAP23025 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
XPAP23025 RNU4-47P-201ENST00000410876 114 ntBASIC3.26□□□□□ -1.89
XPAP23025 RPL21P38-201ENST00000418090 167 ntBASIC3.26□□□□□ -1.89
XPAP23025 AL590135.1-201ENST00000422215 156 ntBASIC3.26□□□□□ -1.89
XPAP23025 AC019205.3-201ENST00000424573 156 ntBASIC3.26□□□□□ -1.89
XPAP23025 WARS2P1-201ENST00000429678 537 ntBASIC3.26□□□□□ -1.89
XPAP23025 AC016700.2-201ENST00000446011 156 ntBASIC3.26□□□□□ -1.89
XPAP23025 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.26□□□□□ -1.89
XPAP23025 AP001324.2-201ENST00000461163 319 ntBASIC3.26□□□□□ -1.89
XPAP23025 AC109925.1-201ENST00000478069 331 ntBASIC3.26□□□□□ -1.89
XPAP23025 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms