Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 TPTE2P4-201ENST00000258589 1605 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.4□□□□□ -2.19
COL5A1P20908 MTND4P14-201ENST00000435799 1354 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RNU4-41P-201ENST00000364426 143 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 Y_RNA.324-201ENST00000365165 102 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 SNORD115-7-201ENST00000365306 82 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RNU6-393P-201ENST00000384475 107 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.4□□□□□ -2.19
COL5A1P20908 GPM6BP2-201ENST00000432046 144 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.4□□□□□ -2.19
COL5A1P20908 GPM6BP1-201ENST00000446387 144 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 SCARNA18-201ENST00000459004 134 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AL135752.1-201ENST00000479477 471 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.4□□□□□ -2.19
COL5A1P20908 AC104136.1-201ENST00000512969 394 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RNU4-49P-201ENST00000516080 140 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RNU6-572P-201ENST00000516724 80 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.4□□□□□ -2.19
COL5A1P20908 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.4□□□□□ -2.19
COL5A1P20908 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.4□□□□□ -2.19
COL5A1P20908 CENPUP1-201ENST00000526649 1202 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.4□□□□□ -2.19
COL5A1P20908 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.4□□□□□ -2.19
COL5A1P20908 RPS15AP11-201ENST00000594193 385 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.4□□□□□ -2.19
COL5A1P20908 AC013553.2-201ENST00000604244 589 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC083806.3-201ENST00000614016 455 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AL161629.2-201ENST00000615347 275 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 RMST_7.1-201ENST00000621935 268 ntBASIC1.4□□□□□ -2.19
COL5A1P20908 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.39□□□□□ -2.19
COL5A1P20908 AL049641.1-201ENST00000441055 1948 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AL359851.1-201ENST00000569460 4997 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
COL5A1P20908 Y_RNA.167-201ENST00000363735 109 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 RNU6-522P-201ENST00000364497 107 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 RNU5E-4P-201ENST00000364931 120 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 SNORA23-201ENST00000365128 182 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 RNU6-166P-201ENST00000384371 107 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL5A1P20908 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.39□□□□□ -2.19
COL5A1P20908 MIR1290-201ENST00000408735 78 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 MIR548J-201ENST00000408833 112 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 UBE2D3P2-201ENST00000424409 445 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 IPO7P1-201ENST00000442031 636 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 RPL37P6-201ENST00000460682 294 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AC083904.1-201ENST00000487828 231 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 AC079140.5-201ENST00000507882 310 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 FAM206BP-201ENST00000510179 541 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.39□□□□□ -2.19
COL5A1P20908 Y_RNA.665-201ENST00000516177 98 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 RNU6-927P-201ENST00000516199 100 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 SNORA40.12-201ENST00000516329 111 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 SNORA25.17-201ENST00000517184 124 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AP006587.4-201ENST00000526053 529 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AL137161.1-201ENST00000532231 390 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 GLYCAM1-201ENST00000546596 285 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.39□□□□□ -2.19
COL5A1P20908 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.39□□□□□ -2.19
COL5A1P20908 MTND4LP5-201ENST00000605152 292 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 Z82243.1-201ENST00000609432 473 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 uc_338.34-201ENST00000617467 174 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 AL136221.1-201ENST00000621449 509 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 TPTEP1-208ENST00000636884 213 ntBASIC1.39□□□□□ -2.19
COL5A1P20908 Y_RNA.70-201ENST00000362886 110 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-797P-201ENST00000363101 109 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-1167P-201ENST00000363227 94 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-38P-201ENST00000384085 107 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 Y_RNA.450-201ENST00000384198 113 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 Y_RNA.534-201ENST00000384599 112 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 SNORD70.1-201ENST00000391007 85 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RPS4XP3-201ENST00000398541 413 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.38□□□□□ -2.19
COL5A1P20908 AL121601.2-201ENST00000438019 707 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 GTF2IP13-201ENST00000438487 386 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A1P20908 HMGN2P18-201ENST00000450680 270 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MTATP6P7-201ENST00000453315 681 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-333P-201ENST00000459117 107 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU6-953P-201ENST00000459154 107 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 SUMO2P6-201ENST00000505273 288 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RBBP4P6-201ENST00000508098 202 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MTND3P25-201ENST00000509243 135 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 RNA5SP503-201ENST00000517047 117 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.38□□□□□ -2.19
COL5A1P20908 BNIP3P6-201ENST00000549284 499 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 AC026371.1-201ENST00000551867 419 ntBASIC1.38□□□□□ -2.19
COL5A1P20908 MIR1273C-201ENST00000578669 77 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms