Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RNU6-897P-201ENST00000517135 105 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 HSPE1P20-201ENST00000538133 289 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 AC090617.3-201ENST00000573670 475 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 AC009163.5-201ENST00000575421 637 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 MIR3128-201ENST00000581957 66 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 MIR3529-201ENST00000637713 78 ntBASIC2.7□□□□□ -1.98
TNFRSF1BP20333 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.7□□□□□ -1.98
TNFRSF1BP20333 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.180-201ENST00000363867 113 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 SNORD32A-201ENST00000364805 84 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.785-201ENST00000384290 109 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 MIR548I2-201ENST00000408348 149 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC007969.2-201ENST00000441891 191 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AL031659.1-201ENST00000447075 539 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 TOMM22P6-201ENST00000465035 409 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 RPS29P20-201ENST00000489592 171 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 RPL23AP75-201ENST00000491601 451 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC025465.3-201ENST00000510570 311 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC067942.3-201ENST00000512025 362 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 RNU6-138P-201ENST00000515952 107 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 RN7SKP282-201ENST00000516824 299 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AP002770.2-201ENST00000543613 532 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC021739.1-201ENST00000559631 174 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 MIR3910-1-201ENST00000580936 111 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 MIR4506-201ENST00000584693 77 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
TNFRSF1BP20333 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TNFRSF1BP20333 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AP003122.5-201ENST00000527668 3766 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU6-1141P-201ENST00000364520 107 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU1-140P-201ENST00000365040 165 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU6-487P-201ENST00000365430 104 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU6-17P-201ENST00000384245 107 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.483-201ENST00000384380 101 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU6-18P-201ENST00000384527 107 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 MIR153-2-201ENST00000385225 87 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RN7SKP220-201ENST00000410611 288 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNA5SP120-201ENST00000410900 112 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 Z82188.1-201ENST00000436709 154 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 SSXP4-201ENST00000451349 245 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AC006445.1-201ENST00000491925 405 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNU5F-8P-201ENST00000515941 111 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 MRPS36P4-201ENST00000534436 298 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AC006199.1-201ENST00000548728 219 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 AL355877.2-201ENST00000603670 358 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 HSPE1P7-201ENST00000604681 321 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 FTX_2.1-201ENST00000618816 94 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 MIR3199-2-201ENST00000636243 86 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 GABRG2-229ENST00000641017 3628 ntBASIC2.68□□□□□ -1.98
TNFRSF1BP20333 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TNFRSF1BP20333 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFRSF1BP20333 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TNFRSF1BP20333 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFRSF1BP20333 AC010615.1-201ENST00000594254 1764 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.14-201ENST00000362415 103 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.26-201ENST00000362539 101 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.64-201ENST00000362845 102 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 Y_RNA.222-201ENST00000364264 102 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNU6-200P-201ENST00000364743 107 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNA5SP267-201ENST00000364893 126 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNU6-708P-201ENST00000384217 107 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNU6-843P-201ENST00000384454 104 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNVU1-14-201ENST00000384770 164 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RN7SKP123-201ENST00000410732 291 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RNU2-38P-201ENST00000410856 79 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 AL590135.1-201ENST00000422215 156 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFRSF1BP20333 RPL30P1-201ENST00000488676 339 ntBASIC2.67□□□□□ -1.98
TNFRSF1BP20333 AC016632.1-201ENST00000503994 196 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms