Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.03□□□□□ -2.24
CTLA4P16410 AC008945.2-201ENST00000606056 604 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AC122133.1-201ENST00000613964 233 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AC022418.1-201ENST00000624118 445 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.03□□□□□ -2.24
CTLA4P16410 MTND5P9-201ENST00000503854 1755 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 MIR340-201ENST00000362125 95 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU6-428P-201ENST00000362942 107 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU6-112P-201ENST00000363599 104 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU4-56P-201ENST00000364700 142 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU4-91P-201ENST00000364778 135 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 SNORD32A-201ENST00000364805 84 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU6-939P-201ENST00000384634 107 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNA5SP201-201ENST00000410316 124 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU2-41P-201ENST00000410991 178 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU6-195P-201ENST00000411352 109 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AL590135.1-201ENST00000422215 156 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC019205.3-201ENST00000424573 156 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC016700.2-201ENST00000446011 156 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RNU7-125P-201ENST00000458760 62 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 MTCO2P6-201ENST00000463134 685 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 GMFBP1-201ENST00000467831 427 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 RPS26P55-201ENST00000471178 356 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC015911.1-201ENST00000495111 156 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.02□□□□□ -2.25
CTLA4P16410 RNA5SP503-201ENST00000517047 117 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC008015.1-201ENST00000555505 465 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC005668.1-201ENST00000571142 476 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 SNORA77B-201ENST00000578179 125 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC110760.3-201ENST00000598794 467 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC091805.2-201ENST00000603848 235 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC006566.1-201ENST00000608943 513 ntBASIC1.02□□□□□ -2.25
CTLA4P16410 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
CTLA4P16410 MIR302D-201ENST00000362275 68 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 RNU4-48P-201ENST00000365559 182 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 RNU6-1029P-201ENST00000384109 107 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 RNU6-434P-201ENST00000384376 107 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 RNU6-393P-201ENST00000384475 107 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 MIR1-2-201ENST00000384961 85 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 SNORA40.3-201ENST00000390964 122 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 SNORA26.3-201ENST00000391119 136 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 MIR1267-201ENST00000408723 78 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 MTCO3P41-201ENST00000414801 328 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AL117339.3-201ENST00000418733 162 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 CYCSP46-201ENST00000423569 204 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.01□□□□□ -2.25
CTLA4P16410 AL133396.1-201ENST00000432048 687 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.01□□□□□ -2.25
CTLA4P16410 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.01□□□□□ -2.25
CTLA4P16410 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.01□□□□□ -2.25
CTLA4P16410 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 SNRPGP7-201ENST00000469016 106 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.01□□□□□ -2.25
CTLA4P16410 AC079382.1-201ENST00000493346 557 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.01□□□□□ -2.25
CTLA4P16410 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.01□□□□□ -2.25
CTLA4P16410 SNORA31.16-201ENST00000516773 139 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CTLA4P16410 RRN3P3-201ENST00000549207 578 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.01□□□□□ -2.25
CTLA4P16410 ZNF321P-202ENST00000550843 495 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC109446.1-201ENST00000566172 220 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 MIR3923-201ENST00000579521 83 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC245014.2-201ENST00000603689 287 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC246785.4-201ENST00000605374 287 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 MIR98-201ENST00000606724 119 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 AC120349.3-201ENST00000624377 529 ntBASIC1.01□□□□□ -2.25
CTLA4P16410 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTLA4P16410 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTLA4P16410 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
CTLA4P16410 AC092268.1-201ENST00000342691 405 ntBASIC1□□□□□ -2.25
CTLA4P16410 RNU6-414P-201ENST00000363705 104 ntBASIC1□□□□□ -2.25
CTLA4P16410 RNU6-296P-201ENST00000384608 107 ntBASIC1□□□□□ -2.25
CTLA4P16410 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
CTLA4P16410 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1□□□□□ -2.25
CTLA4P16410 RPL23AP95-201ENST00000426806 265 ntBASIC1□□□□□ -2.25
CTLA4P16410 RPL31P35-201ENST00000431058 377 ntBASIC1□□□□□ -2.25
CTLA4P16410 SNAP23P1-201ENST00000433229 246 ntBASIC1□□□□□ -2.25
CTLA4P16410 UBE2V1P8-201ENST00000437166 265 ntBASIC1□□□□□ -2.25
CTLA4P16410 AL022238.1-201ENST00000442557 355 ntBASIC1□□□□□ -2.25
CTLA4P16410 PRPS1P1-201ENST00000445305 876 ntBASIC1□□□□□ -2.25
CTLA4P16410 MTND1P18-201ENST00000448191 573 ntBASIC1□□□□□ -2.25
CTLA4P16410 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1□□□□□ -2.25
CTLA4P16410 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1□□□□□ -2.25
CTLA4P16410 AC022364.2-201ENST00000457963 554 ntBASIC1□□□□□ -2.25
CTLA4P16410 SNORD42A-201ENST00000459584 64 ntBASIC1□□□□□ -2.25
CTLA4P16410 AC097473.1-201ENST00000508142 408 ntBASIC1□□□□□ -2.25
CTLA4P16410 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1□□□□□ -2.25
CTLA4P16410 RNU2-69P-201ENST00000516061 100 ntBASIC1□□□□□ -2.25
CTLA4P16410 SNORA25.17-201ENST00000517184 124 ntBASIC1□□□□□ -2.25
CTLA4P16410 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1□□□□□ -2.25
CTLA4P16410 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1□□□□□ -2.25
CTLA4P16410 HSPE1P4-201ENST00000550617 308 ntBASIC1□□□□□ -2.25
CTLA4P16410 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1□□□□□ -2.25
CTLA4P16410 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1□□□□□ -2.25
CTLA4P16410 MTCO3P23-201ENST00000561363 289 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms