Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RNU6-965P-201ENST00000516721 96 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AC025423.5-201ENST00000550230 219 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.15□□□□□ -2.07
PDGFRAP16234 AC010525.2-201ENST00000590920 195 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AL359314.1-201ENST00000616913 261 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AL450472.1-202ENST00000637286 180 ntBASIC2.15□□□□□ -2.07
PDGFRAP16234 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.15□□□□□ -2.07
PDGFRAP16234 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDGFRAP16234 MTND4P23-201ENST00000447723 1363 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 MIR1294-201ENST00000408503 142 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 SRIP3-201ENST00000413200 219 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.14□□□□□ -2.07
PDGFRAP16234 AC027124.2-201ENST00000428249 105 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 SRIP2-201ENST00000428470 166 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AL121890.1-201ENST00000435457 205 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 RPL23AP7-203ENST00000449021 469 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.14□□□□□ -2.07
PDGFRAP16234 AC091874.1-201ENST00000511402 339 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 RNU6-612P-201ENST00000516909 102 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AC007375.1-201ENST00000554513 578 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 MIR3923-201ENST00000579521 83 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AC100830.2-201ENST00000581636 240 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 BNIP3P25-201ENST00000596023 559 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AC008749.1-201ENST00000597650 306 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 AC139792.2-201ENST00000624218 587 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 MIR1248-201ENST00000629190 106 ntBASIC2.14□□□□□ -2.07
PDGFRAP16234 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PDGFRAP16234 Y_RNA.38-201ENST00000362617 102 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 RNU6-451P-201ENST00000362921 107 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 RNU6-1159P-201ENST00000362933 107 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 RNU6-214P-201ENST00000384130 107 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 MIR676-201ENST00000390702 67 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 BTF3L4P2-201ENST00000392798 346 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 RNA5SP201-201ENST00000410316 124 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AL139156.1-201ENST00000412785 841 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFRAP16234 MTCO1P20-201ENST00000425366 358 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.13□□□□□ -2.07
PDGFRAP16234 AC245102.2-201ENST00000448956 180 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC132942.1-201ENST00000486753 483 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.13□□□□□ -2.07
PDGFRAP16234 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC109635.3-201ENST00000529536 185 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 ZNF519P2-201ENST00000557032 169 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC021231.3-201ENST00000558497 370 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.13□□□□□ -2.07
PDGFRAP16234 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC078795.3-201ENST00000602913 472 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AL078605.1-201ENST00000603529 500 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC068944.2-201ENST00000610373 403 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
PDGFRAP16234 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.13□□□□□ -2.07
PDGFRAP16234 SNORA43.4-201ENST00000629559 138 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
PDGFRAP16234 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFRAP16234 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDGFRAP16234 Y_RNA.3-201ENST00000362331 103 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RNU6-227P-201ENST00000362865 103 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 Y_RNA.402-201ENST00000383972 102 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 Y_RNA.504-201ENST00000384481 104 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PDGFRAP16234 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFRAP16234 UBE2V1P4-201ENST00000425374 344 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFRAP16234 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RPS29P27-201ENST00000463711 170 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RPL9P9-202ENST00000466501 579 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFRAP16234 AC083904.1-201ENST00000487828 231 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.12□□□□□ -2.07
PDGFRAP16234 AC092436.3-201ENST00000511788 257 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RPL39P5-202ENST00000512505 151 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC025465.4-201ENST00000513422 638 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 RNU6-567P-201ENST00000516746 107 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC104576.1-201ENST00000524225 88 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC016957.1-201ENST00000534895 309 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 SCOCP1-201ENST00000554676 349 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.12□□□□□ -2.07
PDGFRAP16234 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.12□□□□□ -2.07
PDGFRAP16234 TPRKBP2-201ENST00000565969 475 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.12□□□□□ -2.07
PDGFRAP16234 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.12□□□□□ -2.07
PDGFRAP16234 FAM157A-202ENST00000615155 405 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 CENPCP1-201ENST00000533085 2578 ntBASIC2.12□□□□□ -2.07
PDGFRAP16234 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
PDGFRAP16234 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
PDGFRAP16234 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms