Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MIR4310-201ENST00000582950 57 ntBASIC5.37□□□□□ -1.55
CD44P16070 RNU6-86P-201ENST00000606534 107 ntBASIC5.37□□□□□ -1.55
CD44P16070 AL512310.12-203ENST00000640543 90 ntBASIC5.37□□□□□ -1.55
CD44P16070 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CD44P16070 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CD44P16070 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CD44P16070 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CD44P16070 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD44P16070 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD44P16070 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
CD44P16070 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CD44P16070 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.36□□□□□ -1.55
CD44P16070 AC004944.1-201ENST00000517807 3059 ntBASIC5.36□□□□□ -1.55
CD44P16070 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CD44P16070 snoU2_19.1-201ENST00000362361 80 ntBASIC5.36□□□□□ -1.55
CD44P16070 U8.4-201ENST00000363626 134 ntBASIC5.36□□□□□ -1.55
CD44P16070 Y_RNA.299-201ENST00000364973 94 ntBASIC5.36□□□□□ -1.55
CD44P16070 SNORA11B-201ENST00000408175 129 ntBASIC5.36□□□□□ -1.55
CD44P16070 RN7SL319P-201ENST00000480656 221 ntBASIC5.36□□□□□ -1.55
CD44P16070 RN7SL727P-201ENST00000482164 296 ntBASIC5.36□□□□□ -1.55
CD44P16070 SCGB1D5P-201ENST00000515134 247 ntBASIC5.36□□□□□ -1.55
CD44P16070 MIR4438-201ENST00000585271 93 ntBASIC5.36□□□□□ -1.55
CD44P16070 AC087685.1-201ENST00000587507 141 ntBASIC5.36□□□□□ -1.55
CD44P16070 AC006116.3-201ENST00000592968 361 ntBASIC5.36□□□□□ -1.55
CD44P16070 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CD44P16070 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD44P16070 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.36□□□□□ -1.55
CD44P16070 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CD44P16070 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CD44P16070 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 AC010680.1-201ENST00000590024 3590 ntBASIC5.35□□□□□ -1.55
CD44P16070 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 SNORD115-28-201ENST00000363931 81 ntBASIC5.35□□□□□ -1.55
CD44P16070 SNORA70-201ENST00000384436 135 ntBASIC5.35□□□□□ -1.55
CD44P16070 AL022718.1-201ENST00000412004 84 ntBASIC5.35□□□□□ -1.55
CD44P16070 AC090844.1-201ENST00000422019 156 ntBASIC5.35□□□□□ -1.55
CD44P16070 SCARNA18B-201ENST00000458806 135 ntBASIC5.35□□□□□ -1.55
CD44P16070 AC023141.12-201ENST00000512399 199 ntBASIC5.35□□□□□ -1.55
CD44P16070 AC092490.3-201ENST00000545370 572 ntBASIC5.35□□□□□ -1.55
CD44P16070 SNORA74C-1-201ENST00000580726 201 ntBASIC5.35□□□□□ -1.55
CD44P16070 MIR6768-201ENST00000610734 72 ntBASIC5.35□□□□□ -1.55
CD44P16070 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CD44P16070 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CD44P16070 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CD44P16070 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.35□□□□□ -1.55
CD44P16070 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CD44P16070 ZNF271P-202ENST00000465539 1970 ntBASIC5.35□□□□□ -1.55
CD44P16070 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.35□□□□□ -1.55
CD44P16070 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CD44P16070 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD44P16070 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD44P16070 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD44P16070 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CD44P16070 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD44P16070 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD44P16070 Z92545.1-201ENST00000411782 234 ntBASIC5.34□□□□□ -1.55
CD44P16070 RPS12P2-201ENST00000439728 269 ntBASIC5.34□□□□□ -1.55
CD44P16070 RN7SL591P-201ENST00000496150 292 ntBASIC5.34□□□□□ -1.55
CD44P16070 AC108729.3-201ENST00000513484 108 ntBASIC5.34□□□□□ -1.55
CD44P16070 RNA5SP464-201ENST00000516251 108 ntBASIC5.34□□□□□ -1.55
CD44P16070 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.34□□□□□ -1.55
CD44P16070 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.34□□□□□ -1.55
CD44P16070 AC006065.5-201ENST00000623427 349 ntBASIC5.34□□□□□ -1.55
CD44P16070 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.34□□□□□ -1.55
CD44P16070 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CD44P16070 AL139811.1-201ENST00000424779 2299 ntBASIC5.34□□□□□ -1.56
CD44P16070 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD44P16070 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD44P16070 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD44P16070 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD44P16070 SCARNA15-201ENST00000607520 4325 ntBASIC5.33□□□□□ -1.56
CD44P16070 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD44P16070 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD44P16070 RNU6-655P-201ENST00000362858 107 ntBASIC5.33□□□□□ -1.56
CD44P16070 SNORD32B-201ENST00000364460 84 ntBASIC5.33□□□□□ -1.56
CD44P16070 RN7SKP200-201ENST00000410564 320 ntBASIC5.33□□□□□ -1.56
CD44P16070 AC016909.1-201ENST00000415916 166 ntBASIC5.33□□□□□ -1.56
CD44P16070 TOMM22P1-201ENST00000418578 312 ntBASIC5.33□□□□□ -1.56
CD44P16070 RNU6-917P-201ENST00000516294 104 ntBASIC5.33□□□□□ -1.56
CD44P16070 AC078899.2-201ENST00000595282 212 ntBASIC5.33□□□□□ -1.56
CD44P16070 MIR4302-201ENST00000638058 60 ntBASIC5.33□□□□□ -1.56
CD44P16070 ANKRD18EP-201ENST00000405487 2632 ntBASIC5.33□□□□□ -1.56
CD44P16070 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD44P16070 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CD44P16070 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.33□□□□□ -1.56
CD44P16070 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC5.32□□□□□ -1.56
CD44P16070 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD44P16070 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD44P16070 RNU6-335P-201ENST00000364563 113 ntBASIC5.32□□□□□ -1.56
CD44P16070 MIR520G-201ENST00000385064 90 ntBASIC5.32□□□□□ -1.56
CD44P16070 RNU7-25P-201ENST00000516544 62 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms