Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 snoU13.4-201ENST00000458916 104 ntBASIC-1□□□□□ -2.57
VCANP13611 RNU6-1218P-201ENST00000458990 108 ntBASIC-1□□□□□ -2.57
VCANP13611 AC010460.2-201ENST00000509054 677 ntBASIC-1□□□□□ -2.57
VCANP13611 AC245008.1-201ENST00000608123 476 ntBASIC-1□□□□□ -2.57
VCANP13611 Y_RNA.49-201ENST00000362714 112 ntBASIC-1□□□□□ -2.57
VCANP13611 RNU6-312P-201ENST00000364629 107 ntBASIC-1□□□□□ -2.57
VCANP13611 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-1□□□□□ -2.57
VCANP13611 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-1□□□□□ -2.57
VCANP13611 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-1□□□□□ -2.57
VCANP13611 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1□□□□□ -2.57
VCANP13611 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1□□□□□ -2.57
VCANP13611 PRELID3BP2-201ENST00000605362 201 ntBASIC-1□□□□□ -2.57
VCANP13611 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
VCANP13611 U8.5-201ENST00000364528 136 ntBASIC-1□□□□□ -2.57
VCANP13611 RNU6-1162P-201ENST00000384443 104 ntBASIC-1□□□□□ -2.57
VCANP13611 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-1□□□□□ -2.57
VCANP13611 FCF1P4-201ENST00000448326 183 ntBASIC-1□□□□□ -2.57
VCANP13611 AC010627.1-201ENST00000503819 1294 ntBASIC-1□□□□□ -2.57
VCANP13611 RNU6-897P-201ENST00000517135 105 ntBASIC-1□□□□□ -2.57
VCANP13611 AL356057.1-201ENST00000533798 831 ntBASIC-1□□□□□ -2.57
VCANP13611 AC091152.3-201ENST00000604227 325 ntBASIC-1□□□□□ -2.57
VCANP13611 PCGEM1.1-201ENST00000613431 131 ntBASIC-1□□□□□ -2.57
VCANP13611 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.01□□□□□ -2.57
VCANP13611 FGF7P5-201ENST00000441829 291 ntBASIC-1.01□□□□□ -2.57
VCANP13611 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-1.01□□□□□ -2.57
VCANP13611 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.01□□□□□ -2.57
VCANP13611 AC004062.1-201ENST00000509926 645 ntBASIC-1.01□□□□□ -2.57
VCANP13611 AC023824.3-201ENST00000569003 562 ntBASIC-1.01□□□□□ -2.57
VCANP13611 AF129408.1-201ENST00000608767 431 ntBASIC-1.01□□□□□ -2.57
VCANP13611 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
VCANP13611 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
VCANP13611 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-1.01□□□□□ -2.57
VCANP13611 SNORA31.17-201ENST00000516953 127 ntBASIC-1.01□□□□□ -2.57
VCANP13611 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.02□□□□□ -2.57
VCANP13611 SNORA40.8-201ENST00000411034 126 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AC005094.1-201ENST00000440420 368 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AC104982.1-201ENST00000478775 574 ntBASIC-1.02□□□□□ -2.57
VCANP13611 RNU6-118P-201ENST00000516552 102 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AC095057.3-201ENST00000567102 1157 ntBASIC-1.02□□□□□ -2.57
VCANP13611 MIR6755-201ENST00000619993 66 ntBASIC-1.02□□□□□ -2.57
VCANP13611 MIR1283-2-201ENST00000408621 87 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-1.02□□□□□ -2.57
VCANP13611 MTCO3P17-201ENST00000443775 513 ntBASIC-1.02□□□□□ -2.57
VCANP13611 MTCO3P10-201ENST00000455912 772 ntBASIC-1.02□□□□□ -2.57
VCANP13611 SNORA31.2-201ENST00000516019 134 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AL445584.3-201ENST00000617173 78 ntBASIC-1.02□□□□□ -2.57
VCANP13611 MIR5739-201ENST00000619803 80 ntBASIC-1.02□□□□□ -2.57
VCANP13611 MTATP6P31-201ENST00000406985 692 ntBASIC-1.02□□□□□ -2.57
VCANP13611 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.02□□□□□ -2.57
VCANP13611 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-1.02□□□□□ -2.57
VCANP13611 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-1.02□□□□□ -2.57
VCANP13611 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.02□□□□□ -2.57
VCANP13611 AC112204.3-201ENST00000623822 332 ntBASIC-1.02□□□□□ -2.57
VCANP13611 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.03□□□□□ -2.57
VCANP13611 RNU6-650P-201ENST00000365658 111 ntBASIC-1.03□□□□□ -2.57
VCANP13611 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-1.03□□□□□ -2.57
VCANP13611 AL158050.1-201ENST00000416077 457 ntBASIC-1.03□□□□□ -2.57
VCANP13611 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-1.03□□□□□ -2.57
VCANP13611 RNA5SP272-201ENST00000516095 111 ntBASIC-1.03□□□□□ -2.57
VCANP13611 RNU2-60P-201ENST00000517290 128 ntBASIC-1.03□□□□□ -2.57
VCANP13611 RNU6-428P-201ENST00000362942 107 ntBASIC-1.03□□□□□ -2.57
VCANP13611 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.03□□□□□ -2.57
VCANP13611 MIR493-201ENST00000385254 89 ntBASIC-1.03□□□□□ -2.57
VCANP13611 RNU6-127P-201ENST00000390897 107 ntBASIC-1.03□□□□□ -2.57
VCANP13611 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-1.03□□□□□ -2.57
VCANP13611 NFU1P2-201ENST00000448700 469 ntBASIC-1.03□□□□□ -2.57
VCANP13611 RPL36AP48-201ENST00000485521 314 ntBASIC-1.03□□□□□ -2.57
VCANP13611 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-1.03□□□□□ -2.57
VCANP13611 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-1.03□□□□□ -2.57
VCANP13611 COPS8P3-201ENST00000526024 482 ntBASIC-1.03□□□□□ -2.57
VCANP13611 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-1.03□□□□□ -2.57
VCANP13611 Z82243.1-201ENST00000609432 473 ntBASIC-1.03□□□□□ -2.57
VCANP13611 MIR18A-201ENST00000362310 71 ntBASIC-1.04□□□□□ -2.58
VCANP13611 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.04□□□□□ -2.58
VCANP13611 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC007742.1-201ENST00000425789 329 ntBASIC-1.04□□□□□ -2.58
VCANP13611 ELOCP26-201ENST00000436067 329 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC104164.3-201ENST00000467363 1258 ntBASIC-1.04□□□□□ -2.58
VCANP13611 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC027419.1-201ENST00000522976 328 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-1.04□□□□□ -2.58
VCANP13611 AP003465.2-201ENST00000602571 373 ntBASIC-1.04□□□□□ -2.58
VCANP13611 RNU6-796P-201ENST00000391086 107 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC026616.1-201ENST00000523157 525 ntBASIC-1.04□□□□□ -2.58
VCANP13611 DEFB130C-202ENST00000530001 230 ntBASIC-1.04□□□□□ -2.58
VCANP13611 MTCO2P15-201ENST00000532655 656 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AK6P2-201ENST00000549020 471 ntBASIC-1.04□□□□□ -2.58
VCANP13611 UBE2Q2P6-201ENST00000612666 153 ntBASIC-1.04□□□□□ -2.58
VCANP13611 RNU6-898P-201ENST00000365627 104 ntBASIC-1.04□□□□□ -2.58
VCANP13611 MTATP6P22-201ENST00000507369 598 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-1.04□□□□□ -2.58
VCANP13611 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-1.04□□□□□ -2.58
VCANP13611 AC079791.1-201ENST00000605356 973 ntBASIC-1.04□□□□□ -2.58
VCANP13611 CASC19-280ENST00000642102 1351 ntBASIC-1.04□□□□□ -2.58
VCANP13611 Y_RNA.363-201ENST00000365529 113 ntBASIC-1.05□□□□□ -2.58
VCANP13611 RAB28P5-201ENST00000427490 651 ntBASIC-1.05□□□□□ -2.58
VCANP13611 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-1.05□□□□□ -2.58
VCANP13611 STAG3L5P-204ENST00000443759 179 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AL162395.1-201ENST00000457882 422 ntBASIC-1.05□□□□□ -2.58
VCANP13611 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms