Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
TOP1P11387 HAUS6P2-201ENST00000433254 2404 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU4-20P-201ENST00000365601 151 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU6-395P-201ENST00000365662 106 ntBASIC1.88□□□□□ -2.11
TOP1P11387 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.88□□□□□ -2.11
TOP1P11387 RNU6-38P-201ENST00000384085 107 ntBASIC1.88□□□□□ -2.11
TOP1P11387 Y_RNA.450-201ENST00000384198 113 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU4-46P-201ENST00000410818 138 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU6-1068P-201ENST00000410958 103 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RN7SKP101-201ENST00000411376 320 ntBASIC1.88□□□□□ -2.11
TOP1P11387 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TOP1P11387 MTCO1P20-201ENST00000425366 358 ntBASIC1.88□□□□□ -2.11
TOP1P11387 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.88□□□□□ -2.11
TOP1P11387 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.88□□□□□ -2.11
TOP1P11387 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.88□□□□□ -2.11
TOP1P11387 UBE2V1P8-201ENST00000437166 265 ntBASIC1.88□□□□□ -2.11
TOP1P11387 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.88□□□□□ -2.11
TOP1P11387 AC012308.1-201ENST00000451232 178 ntBASIC1.88□□□□□ -2.11
TOP1P11387 SCARNA18-201ENST00000459004 134 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU6-333P-201ENST00000459117 107 ntBASIC1.88□□□□□ -2.11
TOP1P11387 MED28P2-201ENST00000475771 317 ntBASIC1.88□□□□□ -2.11
TOP1P11387 AL157687.1-201ENST00000554853 619 ntBASIC1.88□□□□□ -2.11
TOP1P11387 MTCO3P23-201ENST00000561363 289 ntBASIC1.88□□□□□ -2.11
TOP1P11387 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.88□□□□□ -2.11
TOP1P11387 MIR548AC-201ENST00000585049 88 ntBASIC1.88□□□□□ -2.11
TOP1P11387 uc_338.15-201ENST00000615470 191 ntBASIC1.88□□□□□ -2.11
TOP1P11387 U1.36-201ENST00000620684 176 ntBASIC1.88□□□□□ -2.11
TOP1P11387 RNU6-858P-201ENST00000362436 107 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-529P-201ENST00000363383 104 ntBASIC1.87□□□□□ -2.11
TOP1P11387 Y_RNA.167-201ENST00000363735 109 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-1303P-201ENST00000364841 107 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-487P-201ENST00000365430 104 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-843P-201ENST00000384454 104 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-45P-201ENST00000384471 107 ntBASIC1.87□□□□□ -2.11
TOP1P11387 MIR186-201ENST00000384988 86 ntBASIC1.87□□□□□ -2.11
TOP1P11387 SNORD70.1-201ENST00000391007 85 ntBASIC1.87□□□□□ -2.11
TOP1P11387 SNORD115-47-201ENST00000391226 86 ntBASIC1.87□□□□□ -2.11
TOP1P11387 MIR1283-2-201ENST00000408621 87 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-607P-201ENST00000411283 108 ntBASIC1.87□□□□□ -2.11
TOP1P11387 FCF1P9-201ENST00000412546 282 ntBASIC1.87□□□□□ -2.11
TOP1P11387 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP1P11387 NDUFB1P2-201ENST00000449477 176 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AL583843.1-201ENST00000456070 346 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RPS29P25-201ENST00000481709 171 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC104136.1-201ENST00000512969 394 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU2-69P-201ENST00000516061 100 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-718P-201ENST00000516166 105 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-1281P-201ENST00000516223 105 ntBASIC1.87□□□□□ -2.11
TOP1P11387 RNU6-1178P-201ENST00000516674 107 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.87□□□□□ -2.11
TOP1P11387 AL137161.1-201ENST00000532231 390 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AP000763.2-201ENST00000540641 163 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP1P11387 AL118558.2-201ENST00000556294 238 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.87□□□□□ -2.11
TOP1P11387 AC093249.1-201ENST00000567049 203 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP1P11387 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP1P11387 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP1P11387 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
TOP1P11387 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
TOP1P11387 MIR3688-2-201ENST00000636963 87 ntBASIC1.87□□□□□ -2.11
TOP1P11387 AC027514.1-201ENST00000588561 1603 ntBASIC1.87□□□□□ -2.11
TOP1P11387 SNORD14B-201ENST00000364533 90 ntBASIC1.86□□□□□ -2.11
TOP1P11387 Y_RNA.256-201ENST00000364594 104 ntBASIC1.86□□□□□ -2.11
TOP1P11387 RNU6-1179P-201ENST00000384667 107 ntBASIC1.86□□□□□ -2.11
TOP1P11387 Y_RNA.623-201ENST00000411128 95 ntBASIC1.86□□□□□ -2.11
TOP1P11387 BX510359.4-201ENST00000423750 193 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
TOP1P11387 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.86□□□□□ -2.11
TOP1P11387 MTND3P16-201ENST00000452205 344 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.86□□□□□ -2.11
TOP1P11387 SNRPFP3-201ENST00000457792 225 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
TOP1P11387 MTND4LP26-201ENST00000518144 282 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
TOP1P11387 AL162413.1-201ENST00000603198 110 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC007014.2-201ENST00000615581 479 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.86□□□□□ -2.11
TOP1P11387 FER-210ENST00000628534 558 ntTSL 5 BASIC1.86□□□□□ -2.11
TOP1P11387 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.86□□□□□ -2.11
TOP1P11387 RBBP8P1-201ENST00000449447 1844 ntBASIC1.86□□□□□ -2.11
TOP1P11387 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.86□□□□□ -2.11
TOP1P11387 MIR412-201ENST00000362142 91 ntBASIC1.85□□□□□ -2.11
TOP1P11387 Y_RNA.9-201ENST00000362354 101 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RNU6-451P-201ENST00000362921 107 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RNY3P3-201ENST00000363816 102 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RNU4-12P-201ENST00000365233 139 ntBASIC1.85□□□□□ -2.11
TOP1P11387 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TOP1P11387 Y_RNA.399-201ENST00000383955 105 ntBASIC1.85□□□□□ -2.11
TOP1P11387 Y_RNA.402-201ENST00000383972 102 ntBASIC1.85□□□□□ -2.11
TOP1P11387 U8.10-201ENST00000384260 133 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RNU6-393P-201ENST00000384475 107 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RPS20P15-201ENST00000412792 311 ntBASIC1.85□□□□□ -2.11
TOP1P11387 VN1R36P-201ENST00000414936 291 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC016831.2-201ENST00000417179 352 ntBASIC1.85□□□□□ -2.11
TOP1P11387 EIF1P1-201ENST00000421436 341 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms