Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
VIMP08670 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
VIMP08670 AC009541.1-201ENST00000438279 2662 ntBASIC2.08□□□□□ -2.08
VIMP08670 RNU6-1159P-201ENST00000362933 107 ntBASIC2.08□□□□□ -2.08
VIMP08670 RNU6-214P-201ENST00000384130 107 ntBASIC2.08□□□□□ -2.08
VIMP08670 SRIP3-201ENST00000413200 219 ntBASIC2.08□□□□□ -2.08
VIMP08670 MTND3P9-201ENST00000429526 346 ntBASIC2.08□□□□□ -2.08
VIMP08670 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
VIMP08670 AC104564.1-201ENST00000493028 407 ntBASIC2.08□□□□□ -2.08
VIMP08670 RN7SL636P-201ENST00000497504 294 ntBASIC2.08□□□□□ -2.08
VIMP08670 AC093259.1-201ENST00000509755 300 ntBASIC2.08□□□□□ -2.08
VIMP08670 RNU6-991P-201ENST00000516168 107 ntBASIC2.08□□□□□ -2.08
VIMP08670 AC109635.3-201ENST00000529536 185 ntBASIC2.08□□□□□ -2.08
VIMP08670 SCOCP1-201ENST00000554676 349 ntBASIC2.08□□□□□ -2.08
VIMP08670 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.08□□□□□ -2.08
VIMP08670 TPRKBP2-201ENST00000565969 475 ntBASIC2.08□□□□□ -2.08
VIMP08670 Z98751.3-201ENST00000604447 521 ntBASIC2.08□□□□□ -2.08
VIMP08670 AP000654.2-201ENST00000605633 586 ntBASIC2.08□□□□□ -2.08
VIMP08670 AC104458.1-201ENST00000608243 463 ntBASIC2.08□□□□□ -2.08
VIMP08670 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VIMP08670 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VIMP08670 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VIMP08670 RNU6-227P-201ENST00000362865 103 ntBASIC2.07□□□□□ -2.08
VIMP08670 SNORA80A-201ENST00000363922 136 ntBASIC2.07□□□□□ -2.08
VIMP08670 Y_RNA.256-201ENST00000364594 104 ntBASIC2.07□□□□□ -2.08
VIMP08670 Y_RNA.402-201ENST00000383972 102 ntBASIC2.07□□□□□ -2.08
VIMP08670 SNORD14D-201ENST00000384390 87 ntBASIC2.07□□□□□ -2.08
VIMP08670 Y_RNA.516-201ENST00000384541 124 ntBASIC2.07□□□□□ -2.08
VIMP08670 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VIMP08670 SNORA40.19-201ENST00000390846 128 ntBASIC2.07□□□□□ -2.08
VIMP08670 RNA5SP450-201ENST00000411206 102 ntBASIC2.07□□□□□ -2.08
VIMP08670 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.07□□□□□ -2.08
VIMP08670 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.07□□□□□ -2.08
VIMP08670 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.07□□□□□ -2.08
VIMP08670 U8.21-201ENST00000459536 136 ntBASIC2.07□□□□□ -2.08
VIMP08670 HMGN2P26-201ENST00000463169 339 ntBASIC2.07□□□□□ -2.08
VIMP08670 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.07□□□□□ -2.08
VIMP08670 RNU2-44P-201ENST00000516795 194 ntBASIC2.07□□□□□ -2.08
VIMP08670 MTND1P35-201ENST00000526739 508 ntBASIC2.07□□□□□ -2.08
VIMP08670 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
VIMP08670 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.07□□□□□ -2.08
VIMP08670 EIF4BP1-201ENST00000554881 351 ntBASIC2.07□□□□□ -2.08
VIMP08670 AC021231.3-201ENST00000558497 370 ntBASIC2.07□□□□□ -2.08
VIMP08670 AC109446.1-201ENST00000566172 220 ntBASIC2.07□□□□□ -2.08
VIMP08670 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.07□□□□□ -2.08
VIMP08670 CTHRC1P1-201ENST00000605383 469 ntBASIC2.07□□□□□ -2.08
VIMP08670 RNU6-254P-201ENST00000363377 107 ntBASIC2.06□□□□□ -2.08
VIMP08670 U3.12-201ENST00000364498 214 ntBASIC2.06□□□□□ -2.08
VIMP08670 RNU6-378P-201ENST00000384324 107 ntBASIC2.06□□□□□ -2.08
VIMP08670 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
VIMP08670 NDUFB4P4-201ENST00000404822 243 ntBASIC2.06□□□□□ -2.08
VIMP08670 AL135786.1-201ENST00000415892 214 ntBASIC2.06□□□□□ -2.08
VIMP08670 BX510359.4-201ENST00000423750 193 ntBASIC2.06□□□□□ -2.08
VIMP08670 AC096920.1-201ENST00000423991 241 ntBASIC2.06□□□□□ -2.08
VIMP08670 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.06□□□□□ -2.08
VIMP08670 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.06□□□□□ -2.08
VIMP08670 AC245102.2-201ENST00000448956 180 ntBASIC2.06□□□□□ -2.08
VIMP08670 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.06□□□□□ -2.08
VIMP08670 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
VIMP08670 Y_RNA.655-201ENST00000515919 96 ntBASIC2.06□□□□□ -2.08
VIMP08670 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.06□□□□□ -2.08
VIMP08670 AC100830.2-201ENST00000581636 240 ntBASIC2.06□□□□□ -2.08
VIMP08670 PCGEM1.1-201ENST00000613431 131 ntBASIC2.06□□□□□ -2.08
VIMP08670 AC024614.3-201ENST00000637860 256 ntBASIC2.06□□□□□ -2.08
VIMP08670 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
VIMP08670 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VIMP08670 Y_RNA.9-201ENST00000362354 101 ntBASIC2.05□□□□□ -2.08
VIMP08670 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
VIMP08670 RNU6-1252P-201ENST00000363054 104 ntBASIC2.05□□□□□ -2.08
VIMP08670 RNU6-26P-201ENST00000383985 107 ntBASIC2.05□□□□□ -2.08
VIMP08670 RNU6-332P-201ENST00000391193 108 ntBASIC2.05□□□□□ -2.08
VIMP08670 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
VIMP08670 MIR1283-2-201ENST00000408621 87 ntBASIC2.05□□□□□ -2.08
VIMP08670 UBE2V1P4-201ENST00000425374 344 ntBASIC2.05□□□□□ -2.08
VIMP08670 NDUFA5P4-201ENST00000436704 385 ntBASIC2.05□□□□□ -2.08
VIMP08670 AC021146.2-201ENST00000504736 556 ntBASIC2.05□□□□□ -2.08
VIMP08670 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.05□□□□□ -2.08
VIMP08670 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
VIMP08670 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.05□□□□□ -2.08
VIMP08670 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.05□□□□□ -2.08
VIMP08670 CYP4A27P-201ENST00000567218 190 ntBASIC2.05□□□□□ -2.08
VIMP08670 RMST_3.1-201ENST00000611651 109 ntBASIC2.05□□□□□ -2.08
VIMP08670 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
VIMP08670 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VIMP08670 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
VIMP08670 RNY4P14-201ENST00000363656 96 ntBASIC2.04□□□□□ -2.08
VIMP08670 U3.9-201ENST00000363823 204 ntBASIC2.04□□□□□ -2.08
VIMP08670 RNU6-1164P-201ENST00000364428 107 ntBASIC2.04□□□□□ -2.08
VIMP08670 RNU6-234P-201ENST00000365229 104 ntBASIC2.04□□□□□ -2.08
VIMP08670 RNU6-1215P-201ENST00000384441 102 ntBASIC2.04□□□□□ -2.08
VIMP08670 RN7SKP284-201ENST00000411002 343 ntBASIC2.04□□□□□ -2.08
VIMP08670 RNU6-325P-201ENST00000411132 105 ntBASIC2.04□□□□□ -2.08
VIMP08670 MTCO1P21-201ENST00000416634 589 ntBASIC2.04□□□□□ -2.08
VIMP08670 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.04□□□□□ -2.08
VIMP08670 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.04□□□□□ -2.08
VIMP08670 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.04□□□□□ -2.08
VIMP08670 AC132942.1-201ENST00000486753 483 ntBASIC2.04□□□□□ -2.08
VIMP08670 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
VIMP08670 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.04□□□□□ -2.08
VIMP08670 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 410.6 ms