Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 Z98751.3-201ENST00000604447 521 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 BNIP3P10-201ENST00000605360 577 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 AP000654.2-201ENST00000605633 586 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 RNU6-89P-201ENST00000606519 100 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 AF250324.2-201ENST00000608299 610 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 SNORA43.4-201ENST00000629559 138 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 AC068137.3-201ENST00000639191 341 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.9□□□□□ -2.11
SFTPBP07988 AC009541.1-201ENST00000438279 2662 ntBASIC1.9□□□□□ -2.11
SFTPBP07988 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
SFTPBP07988 MTND4P23-201ENST00000447723 1363 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNU6-1164P-201ENST00000364428 107 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNU6-522P-201ENST00000364497 107 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 Y_RNA.318-201ENST00000365131 97 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNU6-1329P-201ENST00000365664 107 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 SNORA40.19-201ENST00000390846 128 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNU11-3P-201ENST00000391111 133 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MTCYBP2-201ENST00000407745 171 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SFTPBP07988 SRIP2-201ENST00000428470 166 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MTND3P9-201ENST00000429526 346 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MTCO2P7-201ENST00000446518 666 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC245102.2-201ENST00000448956 180 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.89□□□□□ -2.11
SFTPBP07988 RNU6-1037P-201ENST00000459571 107 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RPS27P21-201ENST00000486977 252 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC008628.2-201ENST00000502605 298 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 RNU6-506P-201ENST00000516553 94 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 SNORD60.2-201ENST00000516883 86 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.89□□□□□ -2.11
SFTPBP07988 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 MIR3923-201ENST00000579521 83 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 BNIP3P25-201ENST00000596023 559 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AL162413.1-201ENST00000603198 110 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC004492.1-201ENST00000607036 742 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.89□□□□□ -2.11
SFTPBP07988 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.89□□□□□ -2.11
SFTPBP07988 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SFTPBP07988 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SFTPBP07988 MTND5P6-201ENST00000422338 1798 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SFTPBP07988 RNU6-1317P-201ENST00000364582 104 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SFTPBP07988 AL512604.1-201ENST00000404812 257 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AL590002.1-201ENST00000406554 418 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 RNA5SP201-201ENST00000410316 124 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 ARL5AP1-201ENST00000418991 388 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.88□□□□□ -2.11
SFTPBP07988 MRPS10P2-201ENST00000431226 381 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 HMGN2P3-201ENST00000433603 273 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 HMGN2P5-201ENST00000436882 273 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AL359672.1-201ENST00000442302 409 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 PMCHL2-203ENST00000457791 237 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 RNU6-1332P-201ENST00000516666 104 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.88□□□□□ -2.11
SFTPBP07988 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.88□□□□□ -2.11
SFTPBP07988 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.88□□□□□ -2.11
SFTPBP07988 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AC015540.1-201ENST00000615828 501 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AC009831.4-201ENST00000620744 325 ntBASIC1.88□□□□□ -2.11
SFTPBP07988 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
SFTPBP07988 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SFTPBP07988 Y_RNA.38-201ENST00000362617 102 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RNU6-1090P-201ENST00000364065 94 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RNU6-234P-201ENST00000365229 104 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RNU6-26P-201ENST00000383985 107 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 EIF4E2P1-201ENST00000393781 255 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RNU6-908P-201ENST00000410160 94 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.87□□□□□ -2.11
SFTPBP07988 ERLEC1P1-201ENST00000433806 578 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RPL23AP3-201ENST00000453844 468 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AMD1P1-201ENST00000457220 922 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RPL9P9-202ENST00000466501 579 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC104564.1-201ENST00000493028 407 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC021146.2-201ENST00000504736 556 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC092436.3-201ENST00000511788 257 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC025465.4-201ENST00000513422 638 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 RNA5SP490-201ENST00000517141 136 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AL157687.1-201ENST00000554853 619 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC021231.3-201ENST00000558497 370 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 PCGEM1.1-201ENST00000613431 131 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 FAM157A-202ENST00000615155 405 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 FER-210ENST00000628534 558 ntTSL 5 BASIC1.87□□□□□ -2.11
SFTPBP07988 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms