Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SNORA51.11-201ENST00000384442 131 ntBASIC3.62□□□□□ -1.83
APPP05067 SNORA69.1-201ENST00000390904 137 ntBASIC3.62□□□□□ -1.83
APPP05067 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
APPP05067 RNU6-1245P-201ENST00000411130 106 ntBASIC3.62□□□□□ -1.83
APPP05067 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.62□□□□□ -1.83
APPP05067 AL365496.1-201ENST00000426885 215 ntBASIC3.62□□□□□ -1.83
APPP05067 RPL39P29-201ENST00000447779 157 ntBASIC3.62□□□□□ -1.83
APPP05067 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APPP05067 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.62□□□□□ -1.83
APPP05067 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.62□□□□□ -1.83
APPP05067 AC006026.2-201ENST00000457376 180 ntBASIC3.62□□□□□ -1.83
APPP05067 RPS29P2-201ENST00000479278 136 ntBASIC3.62□□□□□ -1.83
APPP05067 RN7SL20P-201ENST00000488827 297 ntBASIC3.62□□□□□ -1.83
APPP05067 RNU5F-8P-201ENST00000515941 111 ntBASIC3.62□□□□□ -1.83
APPP05067 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.62□□□□□ -1.83
APPP05067 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.62□□□□□ -1.83
APPP05067 AP000942.4-201ENST00000604811 241 ntBASIC3.62□□□□□ -1.83
APPP05067 RPL23AP88-201ENST00000605759 454 ntBASIC3.62□□□□□ -1.83
APPP05067 7SK.10-201ENST00000621414 298 ntBASIC3.62□□□□□ -1.83
APPP05067 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APPP05067 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
APPP05067 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APPP05067 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APPP05067 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.61□□□□□ -1.83
APPP05067 RNU6-529P-201ENST00000363383 104 ntBASIC3.61□□□□□ -1.83
APPP05067 Y_RNA.222-201ENST00000364264 102 ntBASIC3.61□□□□□ -1.83
APPP05067 RNU6-196P-201ENST00000384315 107 ntBASIC3.61□□□□□ -1.83
APPP05067 RNU6-19P-201ENST00000384718 107 ntBASIC3.61□□□□□ -1.83
APPP05067 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.61□□□□□ -1.83
APPP05067 RNU6-130P-201ENST00000411112 103 ntBASIC3.61□□□□□ -1.83
APPP05067 RPL19P1-201ENST00000411635 428 ntBASIC3.61□□□□□ -1.83
APPP05067 PTGES3P4-201ENST00000426243 356 ntBASIC3.61□□□□□ -1.83
APPP05067 AC087477.1-201ENST00000465747 340 ntBASIC3.61□□□□□ -1.83
APPP05067 AC010469.2-201ENST00000496412 480 ntBASIC3.61□□□□□ -1.83
APPP05067 RNU7-4P-201ENST00000516961 62 ntBASIC3.61□□□□□ -1.83
APPP05067 Y_RNA.715-201ENST00000517082 110 ntBASIC3.61□□□□□ -1.83
APPP05067 SNORA31.21-201ENST00000517180 77 ntBASIC3.61□□□□□ -1.83
APPP05067 Y_RNA.721-201ENST00000517207 102 ntBASIC3.61□□□□□ -1.83
APPP05067 AC245166.1-201ENST00000521012 253 ntBASIC3.61□□□□□ -1.83
APPP05067 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.61□□□□□ -1.83
APPP05067 AC090517.1-201ENST00000569307 266 ntBASIC3.61□□□□□ -1.83
APPP05067 AL021879.1-201ENST00000611756 288 ntBASIC3.61□□□□□ -1.83
APPP05067 AC007318.2-201ENST00000620999 243 ntBASIC3.61□□□□□ -1.83
APPP05067 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APPP05067 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
APPP05067 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.6□□□□□ -1.83
APPP05067 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APPP05067 Y_RNA.105-201ENST00000363182 111 ntBASIC3.6□□□□□ -1.83
APPP05067 Y_RNA.193-201ENST00000363979 102 ntBASIC3.6□□□□□ -1.83
APPP05067 Z92545.1-201ENST00000411782 234 ntBASIC3.6□□□□□ -1.83
APPP05067 snoU13.30-201ENST00000458951 104 ntBASIC3.6□□□□□ -1.83
APPP05067 AP001324.2-201ENST00000461163 319 ntBASIC3.6□□□□□ -1.83
APPP05067 S100A11P2-201ENST00000467589 312 ntBASIC3.6□□□□□ -1.83
APPP05067 AC104564.1-201ENST00000493028 407 ntBASIC3.6□□□□□ -1.83
APPP05067 MTCO2P24-201ENST00000515611 426 ntBASIC3.6□□□□□ -1.83
APPP05067 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.6□□□□□ -1.83
APPP05067 AC007375.1-201ENST00000554513 578 ntBASIC3.6□□□□□ -1.83
APPP05067 UBL5P4-201ENST00000562584 236 ntBASIC3.6□□□□□ -1.83
APPP05067 AC104581.2-201ENST00000572227 430 ntBASIC3.6□□□□□ -1.83
APPP05067 VN1R91P-201ENST00000594377 169 ntBASIC3.6□□□□□ -1.83
APPP05067 RPL23AP78-201ENST00000599928 470 ntBASIC3.6□□□□□ -1.83
APPP05067 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APPP05067 AL365361.1-201ENST00000566942 3481 ntBASIC3.6□□□□□ -1.83
APPP05067 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
APPP05067 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.6□□□□□ -1.83
APPP05067 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APPP05067 AC000403.1-201ENST00000613696 3585 ntBASIC3.59□□□□□ -1.83
APPP05067 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
APPP05067 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APPP05067 RNU5B-2P-201ENST00000363036 113 ntBASIC3.59□□□□□ -1.83
APPP05067 RNU1-109P-201ENST00000383960 147 ntBASIC3.59□□□□□ -1.83
APPP05067 RNA5SP274-201ENST00000410484 108 ntBASIC3.59□□□□□ -1.83
APPP05067 ELOCP20-201ENST00000422460 345 ntBASIC3.59□□□□□ -1.83
APPP05067 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
APPP05067 GPM6BP3-201ENST00000442797 145 ntBASIC3.59□□□□□ -1.83
APPP05067 Z96811.1-201ENST00000445880 108 ntBASIC3.59□□□□□ -1.83
APPP05067 MTCO3P8-201ENST00000453691 755 ntBASIC3.59□□□□□ -1.83
APPP05067 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.59□□□□□ -1.83
APPP05067 RN7SKP210-201ENST00000459176 261 ntBASIC3.59□□□□□ -1.83
APPP05067 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.59□□□□□ -1.83
APPP05067 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.59□□□□□ -1.83
APPP05067 RNU6-475P-201ENST00000516073 104 ntBASIC3.59□□□□□ -1.83
APPP05067 SNORA31.6-201ENST00000516241 130 ntBASIC3.59□□□□□ -1.83
APPP05067 SNORA40.14-201ENST00000516543 86 ntBASIC3.59□□□□□ -1.83
APPP05067 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.59□□□□□ -1.83
APPP05067 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.59□□□□□ -1.83
APPP05067 SCARNA4-201ENST00000629045 128 ntBASIC3.59□□□□□ -1.83
APPP05067 AC091564.4-201ENST00000533934 2194 ntBASIC3.59□□□□□ -1.84
APPP05067 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APPP05067 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.58□□□□□ -1.84
APPP05067 AC233263.6-201ENST00000631132 1963 ntBASIC3.58□□□□□ -1.84
APPP05067 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
APPP05067 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
APPP05067 RNU6-1285P-201ENST00000363480 105 ntBASIC3.58□□□□□ -1.84
APPP05067 CD24P4-201ENST00000382840 243 ntBASIC3.58□□□□□ -1.84
APPP05067 Y_RNA.574-201ENST00000384766 95 ntBASIC3.58□□□□□ -1.84
APPP05067 RNU6-750P-201ENST00000390946 107 ntBASIC3.58□□□□□ -1.84
APPP05067 AL590556.1-201ENST00000423231 483 ntBASIC3.58□□□□□ -1.84
APPP05067 ARL5AP4-201ENST00000430731 512 ntBASIC3.58□□□□□ -1.84
APPP05067 DYNLT3P2-201ENST00000442517 295 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms