Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNA5SP454-201ENST00000517231 127 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.04□□□□□ -2.08
MT-ND1P03886 AC134698.4-201ENST00000523451 826 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AP005639.2-201ENST00000527592 928 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.04□□□□□ -2.08
MT-ND1P03886 CPDP1-201ENST00000579660 283 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 MIR548S-201ENST00000581352 82 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AC005730.3-201ENST00000583067 366 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 BNIP3P16-201ENST00000589779 534 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 RPL30P11-203ENST00000598995 310 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.04□□□□□ -2.08
MT-ND1P03886 AL355073.2-201ENST00000612106 557 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AL159153.1-201ENST00000619688 317 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 AP006437.1-201ENST00000641440 3685 ntBASIC2.04□□□□□ -2.08
MT-ND1P03886 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.03□□□□□ -2.08
MT-ND1P03886 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.03□□□□□ -2.08
MT-ND1P03886 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 SNORD32A-201ENST00000364805 84 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
MT-ND1P03886 SNORA67.4-201ENST00000384688 142 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
MT-ND1P03886 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
MT-ND1P03886 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.03□□□□□ -2.08
MT-ND1P03886 AC008267.5-201ENST00000424928 265 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AIMP1P2-201ENST00000425294 312 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AL645568.3-201ENST00000433683 316 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND1P03886 AC098614.3-201ENST00000438957 440 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 MTND4LP16-201ENST00000440828 295 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
MT-ND1P03886 AC130509.1-201ENST00000464158 433 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 RPL9P9-202ENST00000466501 579 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC091951.2-201ENST00000500762 203 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC103851.1-201ENST00000506833 274 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC096745.1-201ENST00000509945 370 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 RNU6-507P-201ENST00000516045 100 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 RNA5SP137-201ENST00000516833 135 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 MIR3162-201ENST00000581818 82 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC007229.1-201ENST00000590455 412 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 VN1R107P-201ENST00000601784 209 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 MIR6840-201ENST00000611937 71 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 uc_338.15-201ENST00000615470 191 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC092794.2-201ENST00000620933 563 ntBASIC2.03□□□□□ -2.08
MT-ND1P03886 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
MT-ND1P03886 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
MT-ND1P03886 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND1P03886 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND1P03886 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MT-ND1P03886 Y_RNA.166-201ENST00000363730 102 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 Y_RNA.339-201ENST00000365325 102 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 SNORA25B-201ENST00000365507 128 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RNU6-43P-201ENST00000384302 107 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RN7SKP32-201ENST00000410167 303 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RNU2-23P-201ENST00000410545 195 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND1P03886 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND1P03886 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.02□□□□□ -2.09
MT-ND1P03886 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.02□□□□□ -2.09
MT-ND1P03886 RPL39P29-201ENST00000447779 157 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 MTND1P17-201ENST00000448961 204 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 MTND3P10-201ENST00000450967 341 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 PTP4A1P4-201ENST00000512479 322 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RNU2-53P-201ENST00000516257 147 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RNU6-612P-201ENST00000516909 102 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND1P03886 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND1P03886 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.02□□□□□ -2.09
MT-ND1P03886 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND1P03886 AP001836.1-201ENST00000604675 523 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.02□□□□□ -2.09
MT-ND1P03886 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.02□□□□□ -2.09
MT-ND1P03886 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
MT-ND1P03886 RNU6-1285P-201ENST00000363480 105 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 RNU6-1013P-201ENST00000384180 107 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 MIR186-201ENST00000384988 86 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 NDUFB4P4-201ENST00000404822 243 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 MIR548K-201ENST00000408406 116 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.01□□□□□ -2.09
MT-ND1P03886 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND1P03886 MTND4LP11-201ENST00000422184 280 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 MTND3P9-201ENST00000429526 346 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 RPS15AP10-201ENST00000432472 382 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 HMGB1P18-201ENST00000438801 619 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 AL353572.1-201ENST00000442490 417 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.01□□□□□ -2.09
MT-ND1P03886 MTND4P18-201ENST00000447010 465 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.01□□□□□ -2.09
MT-ND1P03886 MTND5P5-201ENST00000503764 376 ntBASIC2.01□□□□□ -2.09
MT-ND1P03886 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms