Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC010493.1-201ENST00000513479 292 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MIR449C-201ENST00000516047 92 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 TRAV32-201ENST00000553993 340 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC078795.3-201ENST00000602913 472 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AP001836.1-201ENST00000604675 523 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RNU6-85P-201ENST00000605989 107 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RN7SKP299-201ENST00000606679 301 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AP001330.5-201ENST00000607176 411 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC007684.1-201ENST00000609671 477 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 U2.17-201ENST00000611454 95 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 uc_338.34-201ENST00000617467 174 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 SNORA43.4-201ENST00000629559 138 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MTND4P14-201ENST00000435799 1354 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.111-201ENST00000363248 100 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 SNORD114-6-201ENST00000364393 72 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.332-201ENST00000365271 113 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 SNORD116-1-201ENST00000384335 95 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 RNY3P9-201ENST00000384727 106 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 RNA5SP501-201ENST00000410990 112 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AL590135.1-201ENST00000422215 156 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 EIF4EP2-201ENST00000422816 654 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC019205.3-201ENST00000424573 156 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC016700.2-201ENST00000446011 156 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC015911.1-201ENST00000495111 156 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AK3P2-201ENST00000507976 429 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 SNORA14.1-201ENST00000516113 141 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC069113.1-201ENST00000517763 267 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC104383.1-201ENST00000530297 370 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 HSPE1P4-201ENST00000550617 308 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AL118558.2-201ENST00000556294 238 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 MIR3169-201ENST00000578032 83 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC012507.3-201ENST00000603556 477 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC097520.1-201ENST00000624435 385 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 AC022513.1-201ENST00000624512 117 ntBASIC1.29□□□□□ -2.2
HLA-DQB1P01920 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
HLA-DQB1P01920 MIR340-201ENST00000362125 95 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 RNU1-62P-201ENST00000362599 164 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.296-201ENST00000364930 108 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HLA-DQB1P01920 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
HLA-DQB1P01920 RNU6-38P-201ENST00000384085 107 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 SNORA70B-201ENST00000384210 135 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.500-201ENST00000384466 111 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 RPL17P50-201ENST00000396131 546 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AP000275.1-201ENST00000411943 390 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC009310.1-201ENST00000414414 451 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AL590556.1-201ENST00000423231 483 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 UBE2V1P4-201ENST00000425374 344 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 HMGB1P18-201ENST00000438801 619 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 MTCO2P3-201ENST00000442543 421 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 HMGN2P18-201ENST00000450680 270 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 RPL31P3-201ENST00000458430 332 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 MTCO3P38-201ENST00000468910 766 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 SNRPGP7-201ENST00000469016 106 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.675-201ENST00000516389 149 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB1P01920 MTND4P7-201ENST00000523876 130 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AP003034.1-201ENST00000534621 422 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AK6P1-201ENST00000540219 478 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 GNAI2P1-201ENST00000541815 315 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DQB1P01920 VN1R80P-201ENST00000597126 338 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC245008.1-201ENST00000608123 476 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 MIR8081-201ENST00000611533 95 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 PCGEM1.1-201ENST00000613431 131 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 AC006026.1-201ENST00000444025 1803 ntBASIC1.28□□□□□ -2.2
HLA-DQB1P01920 MTND4P23-201ENST00000447723 1363 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 Y_RNA.167-201ENST00000363735 109 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 RNU6-26P-201ENST00000383985 107 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 SNORD73A-201ENST00000386062 65 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 AL033519.2-201ENST00000403958 392 ntBASIC1.27□□□□□ -2.21
HLA-DQB1P01920 RNU4-55P-201ENST00000410731 137 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms