Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP000907.4-201ENST00000604143 237 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 ELOCP5-201ENST00000604924 333 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 DISC2.1-201ENST00000612827 205 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC090517.3-201ENST00000625170 141 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC024614.3-201ENST00000637860 256 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 AC100810.6-201ENST00000638068 285 ntBASIC2.11□□□□□ -2.07
PDGFBP01127 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PDGFBP01127 SNORA16B-201ENST00000364674 135 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RNA5SP190-201ENST00000365222 118 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RNU6-877P-201ENST00000383868 107 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 CBX3P9-201ENST00000402326 552 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AL591034.2-201ENST00000402839 359 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RNU6-908P-201ENST00000410160 94 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFBP01127 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFBP01127 MTND1P4-201ENST00000435196 415 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 MTND1P34-201ENST00000438556 671 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFBP01127 AL121594.1-201ENST00000475906 575 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AP001025.1-201ENST00000486139 332 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RPS27P27-201ENST00000498779 255 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 RNU6-273P-201ENST00000516937 96 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC069113.1-201ENST00000517763 267 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC107953.1-201ENST00000522216 297 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC023050.3-201ENST00000541142 333 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC090115.3-201ENST00000553218 849 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.1□□□□□ -2.07
PDGFBP01127 RNU6-89P-201ENST00000606519 100 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 AC090517.2-201ENST00000614966 680 ntBASIC2.1□□□□□ -2.07
PDGFBP01127 FER-210ENST00000628534 558 ntTSL 5 BASIC2.1□□□□□ -2.07
PDGFBP01127 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFBP01127 Y_RNA.6-201ENST00000362350 114 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 RNU1-23P-201ENST00000363361 144 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 Y_RNA.231-201ENST00000364358 102 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 Y_RNA.399-201ENST00000383955 105 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 U8.10-201ENST00000384260 133 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 RNU6-1245P-201ENST00000411130 106 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.09□□□□□ -2.07
PDGFBP01127 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.09□□□□□ -2.07
PDGFBP01127 AL445685.2-201ENST00000422551 342 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 AC003989.2-201ENST00000440224 169 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
PDGFBP01127 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.09□□□□□ -2.07
PDGFBP01127 AC018868.1-201ENST00000491307 315 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.09□□□□□ -2.07
PDGFBP01127 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.09□□□□□ -2.07
PDGFBP01127 SNORA14.1-201ENST00000516113 141 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 RNU6-1332P-201ENST00000516666 104 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 PRELID2P1-201ENST00000552837 301 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 MIR4287-201ENST00000579398 78 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 CTHRC1P1-201ENST00000605383 469 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFBP01127 U4.7-201ENST00000638126 106 ntBASIC2.09□□□□□ -2.07
PDGFBP01127 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
PDGFBP01127 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.08
PDGFBP01127 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
PDGFBP01127 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PDGFBP01127 Y_RNA.89-201ENST00000363031 102 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 RNU6-336P-201ENST00000364891 107 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 RNU6-692P-201ENST00000384496 107 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AL512604.1-201ENST00000404812 257 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFBP01127 FCF1P9-201ENST00000412546 282 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 ERLEC1P1-201ENST00000433806 578 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 RPL39P29-201ENST00000447779 157 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AC245102.2-201ENST00000448956 180 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AL137159.1-201ENST00000452808 512 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 snoU13.18-201ENST00000459483 104 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AL163540.1-201ENST00000485382 386 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 MTCYBP40-201ENST00000509390 1135 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFBP01127 SNORA19.2-201ENST00000516013 114 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 SNORD60.2-201ENST00000516883 86 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFBP01127 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFBP01127 AL157687.1-201ENST00000554853 619 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 ZNF519P2-201ENST00000557032 169 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFBP01127 SNRPGP19-201ENST00000603826 189 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 AL137847.3-201ENST00000611521 109 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 RMST_3.1-201ENST00000611651 109 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 MIR3662-201ENST00000637030 95 ntBASIC2.08□□□□□ -2.08
PDGFBP01127 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFBP01127 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
PDGFBP01127 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 RNU6-451P-201ENST00000362921 107 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 RNY4P14-201ENST00000363656 96 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 RNY3P3-201ENST00000363816 102 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 Y_RNA.224-201ENST00000364308 111 ntBASIC2.07□□□□□ -2.08
PDGFBP01127 SNORA32.2-201ENST00000384049 122 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms