Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNU6-331P-201ENST00000384724 107 ntBASIC1.03□□□□□ -2.24
VAPBO95292 RN7SKP61-201ENST00000410642 295 ntBASIC1.03□□□□□ -2.24
VAPBO95292 AC099677.2-201ENST00000436385 175 ntBASIC1.03□□□□□ -2.24
VAPBO95292 PGBD4P5-201ENST00000445958 426 ntBASIC1.03□□□□□ -2.24
VAPBO95292 RNU6-567P-201ENST00000516746 107 ntBASIC1.03□□□□□ -2.24
VAPBO95292 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
VAPBO95292 AC023050.3-201ENST00000541142 333 ntBASIC1.03□□□□□ -2.24
VAPBO95292 ZNF321P-202ENST00000550843 495 ntBASIC1.03□□□□□ -2.24
VAPBO95292 RPL17P51-201ENST00000605218 238 ntBASIC1.03□□□□□ -2.24
VAPBO95292 Z99289.3-201ENST00000605586 594 ntBASIC1.03□□□□□ -2.24
VAPBO95292 AL121992.2-201ENST00000606262 256 ntBASIC1.03□□□□□ -2.24
VAPBO95292 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
VAPBO95292 RNU6-1287P-201ENST00000362914 107 ntBASIC1.02□□□□□ -2.25
VAPBO95292 Y_RNA.132-201ENST00000363421 102 ntBASIC1.02□□□□□ -2.25
VAPBO95292 RNU6-336P-201ENST00000364891 107 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORD115-7-201ENST00000365306 82 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
VAPBO95292 RNU6-1060P-201ENST00000384664 107 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORA12.2-201ENST00000391040 156 ntBASIC1.02□□□□□ -2.25
VAPBO95292 FGF7P8-201ENST00000402994 292 ntBASIC1.02□□□□□ -2.25
VAPBO95292 RNA5SP201-201ENST00000410316 124 ntBASIC1.02□□□□□ -2.25
VAPBO95292 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.02□□□□□ -2.25
VAPBO95292 COX6CP10-201ENST00000416832 224 ntBASIC1.02□□□□□ -2.25
VAPBO95292 AC098592.1-201ENST00000419352 333 ntBASIC1.02□□□□□ -2.25
VAPBO95292 MTCO2P23-201ENST00000425216 680 ntBASIC1.02□□□□□ -2.25
VAPBO95292 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.02□□□□□ -2.25
VAPBO95292 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPBO95292 MTATP6P16-201ENST00000434543 526 ntBASIC1.02□□□□□ -2.25
VAPBO95292 USP9YP12-201ENST00000450481 570 ntBASIC1.02□□□□□ -2.25
VAPBO95292 AC016925.1-201ENST00000458303 298 ntBASIC1.02□□□□□ -2.25
VAPBO95292 snoU13.27-201ENST00000459278 104 ntBASIC1.02□□□□□ -2.25
VAPBO95292 RPS26P45-201ENST00000471748 340 ntBASIC1.02□□□□□ -2.25
VAPBO95292 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPBO95292 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPBO95292 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.02□□□□□ -2.25
VAPBO95292 RNA5SP458-201ENST00000516188 119 ntBASIC1.02□□□□□ -2.25
VAPBO95292 RNU6-1098P-201ENST00000516772 96 ntBASIC1.02□□□□□ -2.25
VAPBO95292 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPBO95292 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPBO95292 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.02□□□□□ -2.25
VAPBO95292 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.02□□□□□ -2.25
VAPBO95292 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.02□□□□□ -2.25
VAPBO95292 AC112191.3-201ENST00000604371 277 ntBASIC1.02□□□□□ -2.25
VAPBO95292 AL356157.2-201ENST00000605122 111 ntBASIC1.02□□□□□ -2.25
VAPBO95292 SNORA63D-201ENST00000364359 132 ntBASIC1.01□□□□□ -2.25
VAPBO95292 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
VAPBO95292 RNU6-53P-201ENST00000365367 106 ntBASIC1.01□□□□□ -2.25
VAPBO95292 RNU6-1176P-201ENST00000390955 107 ntBASIC1.01□□□□□ -2.25
VAPBO95292 HIGD1AP15-201ENST00000416198 280 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.01□□□□□ -2.25
VAPBO95292 Z82205.1-201ENST00000428456 297 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AC002486.1-201ENST00000435098 391 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AL512286.1-201ENST00000439244 400 ntBASIC1.01□□□□□ -2.25
VAPBO95292 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.01□□□□□ -2.25
VAPBO95292 AL133373.1-201ENST00000497098 94 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AC016632.1-201ENST00000503994 196 ntBASIC1.01□□□□□ -2.25
VAPBO95292 RNU6-1178P-201ENST00000516674 107 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.01□□□□□ -2.25
VAPBO95292 EIF4A1P12-201ENST00000551910 141 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AC021231.3-201ENST00000558497 370 ntBASIC1.01□□□□□ -2.25
VAPBO95292 MIR3124-201ENST00000582636 67 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AP003465.2-201ENST00000602571 373 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AC080078.3-201ENST00000605407 463 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AL451064.1-201ENST00000607718 471 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.01□□□□□ -2.25
VAPBO95292 PCGEM1.1-201ENST00000613431 131 ntBASIC1.01□□□□□ -2.25
VAPBO95292 AC027807.2-201ENST00000616099 408 ntBASIC1.01□□□□□ -2.25
VAPBO95292 MTND5P17-201ENST00000418405 1603 ntBASIC1□□□□□ -2.25
VAPBO95292 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VAPBO95292 RNU6-552P-201ENST00000362869 119 ntBASIC1□□□□□ -2.25
VAPBO95292 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1□□□□□ -2.25
VAPBO95292 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1□□□□□ -2.25
VAPBO95292 Z73417.1-201ENST00000447373 778 ntBASIC1□□□□□ -2.25
VAPBO95292 HMGN2P9-201ENST00000476875 229 ntBASIC1□□□□□ -2.25
VAPBO95292 AL163540.1-201ENST00000485382 386 ntBASIC1□□□□□ -2.25
VAPBO95292 RPS23P5-201ENST00000495419 428 ntBASIC1□□□□□ -2.25
VAPBO95292 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1□□□□□ -2.25
VAPBO95292 SCARNA24.1-201ENST00000516465 137 ntBASIC1□□□□□ -2.25
VAPBO95292 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1□□□□□ -2.25
VAPBO95292 AC022878.1-201ENST00000530684 149 ntBASIC1□□□□□ -2.25
VAPBO95292 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1□□□□□ -2.25
VAPBO95292 AC005771.1-201ENST00000585581 349 ntBASIC1□□□□□ -2.25
VAPBO95292 VN1R107P-201ENST00000601784 209 ntBASIC1□□□□□ -2.25
VAPBO95292 AC091805.2-201ENST00000603848 235 ntBASIC1□□□□□ -2.25
VAPBO95292 snoU13.31-201ENST00000607291 104 ntBASIC1□□□□□ -2.25
VAPBO95292 AL133173.2-201ENST00000614270 90 ntBASIC1□□□□□ -2.25
VAPBO95292 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1□□□□□ -2.25
VAPBO95292 AC010608.3-201ENST00000625048 527 ntBASIC1□□□□□ -2.25
VAPBO95292 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1□□□□□ -2.25
VAPBO95292 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
VAPBO95292 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
VAPBO95292 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
VAPBO95292 RNU6-715P-201ENST00000365204 103 ntBASIC0.99□□□□□ -2.25
VAPBO95292 RNU5E-5P-201ENST00000365379 116 ntBASIC0.99□□□□□ -2.25
VAPBO95292 MIR513B-201ENST00000385136 84 ntBASIC0.99□□□□□ -2.25
VAPBO95292 RNU6-550P-201ENST00000391057 101 ntBASIC0.99□□□□□ -2.25
VAPBO95292 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.99□□□□□ -2.25
VAPBO95292 AL606662.1-201ENST00000445763 553 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms