Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL590240.4-201ENST00000616908 390 ntBASIC1.36□□□□□ -2.19
SEMA3DO95025 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SEMA3DO95025 ZNF680P1-201ENST00000436625 1469 ntBASIC1.36□□□□□ -2.19
SEMA3DO95025 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SEMA3DO95025 RNA5SP432-201ENST00000362480 116 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RNU6-23P-201ENST00000363283 107 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RNU6-266P-201ENST00000364225 107 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RNU6-1141P-201ENST00000364520 107 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 SNORD32A-201ENST00000364805 84 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RNU6-827P-201ENST00000365553 106 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RNU6-606P-201ENST00000384721 111 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 AL117339.3-201ENST00000418733 162 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.35□□□□□ -2.19
SEMA3DO95025 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 AC244670.1-201ENST00000436879 112 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 MTND4P32-201ENST00000437189 1237 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 HMGB1P18-201ENST00000438801 619 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
SEMA3DO95025 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RN7SKP219-201ENST00000516825 296 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.35□□□□□ -2.19
SEMA3DO95025 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 RSL24D1P11-201ENST00000591045 491 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC008536.2-201ENST00000607284 349 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 uc_338.11-201ENST00000619132 160 ntBASIC1.35□□□□□ -2.19
SEMA3DO95025 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.35□□□□□ -2.19
SEMA3DO95025 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.35□□□□□ -2.19
SEMA3DO95025 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
SEMA3DO95025 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
SEMA3DO95025 MIR424-201ENST00000362227 98 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RNU6-142P-201ENST00000384019 107 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 Y_RNA.480-201ENST00000384364 102 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RNU6-348P-201ENST00000384386 107 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RNU6-903P-201ENST00000391270 109 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RPS29P13-201ENST00000402041 169 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
SEMA3DO95025 RPS6P15-201ENST00000431996 751 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 USP9YP29-201ENST00000445112 563 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.34□□□□□ -2.19
SEMA3DO95025 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.34□□□□□ -2.19
SEMA3DO95025 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.34□□□□□ -2.19
SEMA3DO95025 AK3P2-201ENST00000507976 429 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.34□□□□□ -2.19
SEMA3DO95025 AC091874.1-201ENST00000511402 339 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RNU6-430P-201ENST00000517078 107 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RNA5SP490-201ENST00000517141 136 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.34□□□□□ -2.19
SEMA3DO95025 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.34□□□□□ -2.19
SEMA3DO95025 COPS8P3-201ENST00000526024 482 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 HSPE1P4-201ENST00000550617 308 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC109446.1-201ENST00000566172 220 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 MIR3169-201ENST00000578032 83 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 MTATP6P3-201ENST00000581686 676 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
SEMA3DO95025 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 MIR4769-201ENST00000584126 77 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 NIFKP6-201ENST00000598115 845 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC012507.3-201ENST00000603556 477 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC073114.1-201ENST00000612027 490 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC072046.2-201ENST00000618366 268 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC130454.1-201ENST00000622948 401 ntBASIC1.34□□□□□ -2.19
SEMA3DO95025 AC245060.5-201ENST00000610778 3293 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 Y_RNA.159-201ENST00000363674 87 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 RNU6-26P-201ENST00000383985 107 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 RNU6-160P-201ENST00000384591 107 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 SNORA48.1-201ENST00000390879 135 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 AL357139.1-201ENST00000407792 426 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 RNU6-174P-201ENST00000410406 106 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 RNU2-29P-201ENST00000410423 189 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.33□□□□□ -2.2
SEMA3DO95025 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 MTCYBP8-201ENST00000422855 651 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.33□□□□□ -2.2
SEMA3DO95025 CETN4P-201ENST00000432407 469 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 SNAP23P1-201ENST00000433229 246 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 AL035666.1-201ENST00000446195 348 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.33□□□□□ -2.2
SEMA3DO95025 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.33□□□□□ -2.2
SEMA3DO95025 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.33□□□□□ -2.2
SEMA3DO95025 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.33□□□□□ -2.2
SEMA3DO95025 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.33□□□□□ -2.2
SEMA3DO95025 MTCO3P23-201ENST00000561363 289 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 MIR4528-201ENST00000577763 90 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 MIR3136-201ENST00000583498 78 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 AC078795.3-201ENST00000602913 472 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 RMST_6.1-201ENST00000611980 203 ntBASIC1.33□□□□□ -2.2
SEMA3DO95025 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SEMA3DO95025 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SEMA3DO95025 RNU6-552P-201ENST00000362869 119 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms