Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 Y_RNA.324-201ENST00000365165 102 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 RNU6-968P-201ENST00000384076 107 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 RNU6-1200P-201ENST00000384162 107 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 RNU6-1105P-201ENST00000384774 107 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AL133475.1-201ENST00000404414 305 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC060773.1-201ENST00000421698 310 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AL606490.4-201ENST00000423117 127 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.48□□□□□ -2.33
SNRNP200O75643 snoU109.3-201ENST00000459477 145 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC010531.2-201ENST00000465012 153 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.48□□□□□ -2.33
SNRNP200O75643 AC010486.2-201ENST00000505572 483 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.48□□□□□ -2.33
SNRNP200O75643 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.48□□□□□ -2.33
SNRNP200O75643 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.48□□□□□ -2.33
SNRNP200O75643 AL590095.2-201ENST00000604136 117 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AL022345.2-201ENST00000606307 135 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 PART1_2.1-201ENST00000612397 250 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 TCL6_2.1-201ENST00000615162 119 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC009509.4-201ENST00000619202 509 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC097372.5-201ENST00000623665 376 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 AC092656.1-203ENST00000624134 423 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 SNORD98-201ENST00000636377 67 ntBASIC0.48□□□□□ -2.33
SNRNP200O75643 SNORA63D-201ENST00000364359 132 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU6-1235P-201ENST00000384559 107 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 MIR544A-201ENST00000384855 91 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU2-64P-201ENST00000411315 191 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AL589872.1-201ENST00000426602 288 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 MTND5P2-201ENST00000442927 1142 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.47□□□□□ -2.33
SNRNP200O75643 snoU13.9-201ENST00000458927 103 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU6-498P-201ENST00000459468 107 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 SNORA31.4-201ENST00000516049 129 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
SNRNP200O75643 AC025678.1-201ENST00000567861 338 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 MIR5697-201ENST00000578045 78 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 SNORA77B-201ENST00000578179 125 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AL139022.2-201ENST00000606934 443 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AL031775.1-201ENST00000607014 887 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 U6.42-201ENST00000618440 107 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC068205.3-201ENST00000636385 468 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU4-15P-201ENST00000362613 141 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 Y_RNA.46-201ENST00000362695 102 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU6-61P-201ENST00000365528 109 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SNRNP200O75643 AL161935.2-201ENST00000414627 60 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 TXNL1P1-201ENST00000429528 554 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.47□□□□□ -2.33
SNRNP200O75643 AC245047.7-201ENST00000440265 293 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC027119.1-201ENST00000440877 241 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.47□□□□□ -2.33
SNRNP200O75643 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.47□□□□□ -2.33
SNRNP200O75643 RNU6-953P-201ENST00000459154 107 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC079140.3-201ENST00000511111 550 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC116347.2-201ENST00000514912 523 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 RN7SKP88-201ENST00000516847 250 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC022878.1-201ENST00000530684 149 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SNRNP200O75643 AC090578.1-201ENST00000604955 591 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 7SK.8-201ENST00000612110 250 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 7SK.11-201ENST00000615477 250 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 AC026585.1-201ENST00000619582 524 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 7SK.13-201ENST00000622040 250 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 FRG1KP-201ENST00000623592 341 ntBASIC0.47□□□□□ -2.33
SNRNP200O75643 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SNRNP200O75643 AC073343.1-201ENST00000328239 651 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNY4P24-201ENST00000362735 96 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU6-105P-201ENST00000363909 104 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU6-439P-201ENST00000384188 106 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 MIR578-201ENST00000384828 96 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 SNORA12.2-201ENST00000391040 156 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AL162395.1-201ENST00000457882 422 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU1-86P-201ENST00000516108 154 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU5A-4P-201ENST00000516588 111 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU1-107P-201ENST00000516617 154 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU6-685P-201ENST00000517088 95 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 AC005520.5-201ENST00000613926 164 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP200O75643 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 Y_RNA.112-201ENST00000363250 102 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 SNORD31B-201ENST00000364977 69 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 MIR520A-201ENST00000384862 85 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 RNA5SP201-201ENST00000410316 124 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP200O75643 AC013470.1-201ENST00000453438 462 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.46□□□□□ -2.34
SNRNP200O75643 RNU6-1132P-201ENST00000459214 107 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 HMGN1P13-201ENST00000505795 138 ntBASIC0.46□□□□□ -2.34
SNRNP200O75643 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms