Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SNORA41-201ENST00000384675 132 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
GPC4O75487 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.4□□□□□ -2.03
GPC4O75487 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.4□□□□□ -2.03
GPC4O75487 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.4□□□□□ -2.03
GPC4O75487 FTH1P25-201ENST00000447665 469 ntBASIC2.4□□□□□ -2.03
GPC4O75487 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.4□□□□□ -2.03
GPC4O75487 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.4□□□□□ -2.03
GPC4O75487 CKS1BP2-201ENST00000497342 240 ntBASIC2.4□□□□□ -2.03
GPC4O75487 MTND5P5-201ENST00000503764 376 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AC022447.4-201ENST00000504053 364 ntBASIC2.4□□□□□ -2.03
GPC4O75487 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
GPC4O75487 AC046134.1-201ENST00000514454 666 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.4□□□□□ -2.03
GPC4O75487 MIR4513-201ENST00000581077 86 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AL034555.1-201ENST00000604816 211 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AC018889.1-201ENST00000605372 397 ntBASIC2.4□□□□□ -2.03
GPC4O75487 AC019193.3-201ENST00000609144 554 ntBASIC2.4□□□□□ -2.03
GPC4O75487 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.4□□□□□ -2.03
GPC4O75487 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.4□□□□□ -2.03
GPC4O75487 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
GPC4O75487 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
GPC4O75487 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.03
GPC4O75487 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
GPC4O75487 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
GPC4O75487 SNORD81.2-201ENST00000365153 76 ntBASIC2.39□□□□□ -2.03
GPC4O75487 Y_RNA.339-201ENST00000365325 102 ntBASIC2.39□□□□□ -2.03
GPC4O75487 RNU6-933P-201ENST00000384424 107 ntBASIC2.39□□□□□ -2.03
GPC4O75487 SNORA26.3-201ENST00000391119 136 ntBASIC2.39□□□□□ -2.03
GPC4O75487 MIR548K-201ENST00000408406 116 ntBASIC2.39□□□□□ -2.03
GPC4O75487 MIR548F5-201ENST00000408421 86 ntBASIC2.39□□□□□ -2.03
GPC4O75487 RN7SKP32-201ENST00000410167 303 ntBASIC2.39□□□□□ -2.03
GPC4O75487 RNU2-63P-201ENST00000410792 194 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC009963.1-201ENST00000417265 157 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.39□□□□□ -2.03
GPC4O75487 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC018868.1-201ENST00000491307 315 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC104564.1-201ENST00000493028 407 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC016632.1-201ENST00000503994 196 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC103851.1-201ENST00000506833 274 ntBASIC2.39□□□□□ -2.03
GPC4O75487 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC109329.2-201ENST00000519658 482 ntBASIC2.39□□□□□ -2.03
GPC4O75487 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.39□□□□□ -2.03
GPC4O75487 AC243829.7-201ENST00000633081 225 ntBASIC2.39□□□□□ -2.03
GPC4O75487 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
GPC4O75487 AC069528.2-201ENST00000624849 1991 ntBASIC2.39□□□□□ -2.03
GPC4O75487 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GPC4O75487 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
GPC4O75487 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
GPC4O75487 SNORD50.1-201ENST00000362987 71 ntBASIC2.38□□□□□ -2.03
GPC4O75487 Y_RNA.88-201ENST00000363029 99 ntBASIC2.38□□□□□ -2.03
GPC4O75487 RNU6-1059P-201ENST00000363752 98 ntBASIC2.38□□□□□ -2.03
GPC4O75487 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
GPC4O75487 RNU6-142P-201ENST00000384019 107 ntBASIC2.38□□□□□ -2.03
GPC4O75487 SNORA12-201ENST00000391162 147 ntBASIC2.38□□□□□ -2.03
GPC4O75487 HMGB3P2-201ENST00000411913 584 ntBASIC2.38□□□□□ -2.03
GPC4O75487 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.38□□□□□ -2.03
GPC4O75487 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.38□□□□□ -2.03
GPC4O75487 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
GPC4O75487 AC068781.1-201ENST00000488231 618 ntBASIC2.38□□□□□ -2.03
GPC4O75487 AC114801.2-201ENST00000503825 781 ntBASIC2.38□□□□□ -2.03
GPC4O75487 AC005741.1-201ENST00000511094 432 ntBASIC2.38□□□□□ -2.03
GPC4O75487 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.38□□□□□ -2.03
GPC4O75487 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.38□□□□□ -2.03
GPC4O75487 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.38□□□□□ -2.03
GPC4O75487 MIR3136-201ENST00000583498 78 ntBASIC2.38□□□□□ -2.03
GPC4O75487 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.38□□□□□ -2.03
GPC4O75487 AL670379.2-201ENST00000604983 252 ntBASIC2.38□□□□□ -2.03
GPC4O75487 AC124303.1-201ENST00000605703 360 ntBASIC2.38□□□□□ -2.03
GPC4O75487 MIR6128-201ENST00000615528 109 ntBASIC2.38□□□□□ -2.03
GPC4O75487 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.38□□□□□ -2.03
GPC4O75487 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
GPC4O75487 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
GPC4O75487 AC131280.1-202ENST00000624067 4211 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AC092268.1-201ENST00000342691 405 ntBASIC2.37□□□□□ -2.03
GPC4O75487 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
GPC4O75487 RNA5SP240-201ENST00000365355 128 ntBASIC2.37□□□□□ -2.03
GPC4O75487 SNORA29-201ENST00000384183 140 ntBASIC2.37□□□□□ -2.03
GPC4O75487 RNU6-784P-201ENST00000384330 106 ntBASIC2.37□□□□□ -2.03
GPC4O75487 Y_RNA.473-201ENST00000384333 102 ntBASIC2.37□□□□□ -2.03
GPC4O75487 SNORA67.4-201ENST00000384688 142 ntBASIC2.37□□□□□ -2.03
GPC4O75487 Y_RNA.597-201ENST00000410463 100 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 HMGB1P18-201ENST00000438801 619 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AC098614.3-201ENST00000438957 440 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 AC145146.1-201ENST00000496370 254 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AC021146.2-201ENST00000504736 556 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 SNORA48.11-201ENST00000517015 89 ntBASIC2.37□□□□□ -2.03
GPC4O75487 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.37□□□□□ -2.03
GPC4O75487 AC005730.3-201ENST00000583067 366 ntBASIC2.37□□□□□ -2.03
GPC4O75487 Z98751.3-201ENST00000604447 521 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AL022345.1-201ENST00000607292 135 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
GPC4O75487 AL355073.2-201ENST00000612106 557 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms