Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-142P-201ENST00000384019 107 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 RNU6-296P-201ENST00000384608 107 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 RNA5SP127-201ENST00000411051 133 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 C1DP2-201ENST00000418167 426 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 CALM2P2-201ENST00000428512 440 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AC145146.1-201ENST00000496370 254 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AC097473.1-201ENST00000508142 408 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 MTND3P5-201ENST00000512798 333 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AC112206.4-201ENST00000515142 405 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AP001893.2-201ENST00000526949 202 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.1□□□□□ -2.23
SHOX2O60902 AP002453.2-201ENST00000533503 320 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.1□□□□□ -2.23
SHOX2O60902 MIR5000-201ENST00000577717 103 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AL031775.1-201ENST00000607014 887 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 AL445984.1-201ENST00000637834 659 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SHOX2O60902 RNU4-15P-201ENST00000362613 141 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RNU4-1-201ENST00000363925 141 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RNU6-660P-201ENST00000364566 109 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RNU6-39P-201ENST00000384344 107 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 MIR520A-201ENST00000384862 85 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.09□□□□□ -2.23
SHOX2O60902 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.09□□□□□ -2.23
SHOX2O60902 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.09□□□□□ -2.23
SHOX2O60902 C8orf59P1-201ENST00000429930 303 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RPS27AP8-201ENST00000452665 445 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC093852.1-201ENST00000503587 266 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC104806.1-201ENST00000508720 308 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 HSPE1P23-201ENST00000509838 286 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 RNA5SP330-201ENST00000517096 96 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC084364.2-201ENST00000546924 395 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.09□□□□□ -2.23
SHOX2O60902 MTND4P33-201ENST00000556706 766 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 HMGB1P33-201ENST00000563485 527 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC091489.2-201ENST00000566263 604 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC008521.1-201ENST00000587471 187 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AP000811.1-201ENST00000603803 651 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 AC069114.2-201ENST00000604699 304 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 MIR8063-201ENST00000621930 81 ntBASIC1.09□□□□□ -2.23
SHOX2O60902 MTND4P9-201ENST00000507819 1346 ntBASIC1.09□□□□□ -2.24
SHOX2O60902 AL391994.1-201ENST00000254724 282 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 RNU4-56P-201ENST00000364700 142 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 RNU1-133P-201ENST00000364867 167 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 SNORD1A-201ENST00000364968 72 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 MTCYBP36-201ENST00000404146 440 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 RNU6-607P-201ENST00000411283 108 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 MTCO3P41-201ENST00000414801 328 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 ELOCP4-201ENST00000420090 333 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 CST2P1-201ENST00000425770 87 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 AC027119.1-201ENST00000440877 241 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.08□□□□□ -2.24
SHOX2O60902 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
SHOX2O60902 AC079140.2-201ENST00000506193 142 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 PCMTD1P2-201ENST00000565017 355 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 AC012414.6-201ENST00000568241 401 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SHOX2O60902 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SHOX2O60902 AC092140.2-201ENST00000618027 521 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 Z69720.2-201ENST00000624755 279 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 AC019226.2-201ENST00000625973 424 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 SNORD98-201ENST00000636377 67 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 AC068205.3-201ENST00000636385 468 ntBASIC1.08□□□□□ -2.24
SHOX2O60902 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
SHOX2O60902 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SHOX2O60902 Y_RNA.274-201ENST00000364714 101 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RNU6-61P-201ENST00000365528 109 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RNU6-1080P-201ENST00000383982 107 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 Y_RNA.608-201ENST00000410647 95 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 MTND1P18-201ENST00000448191 573 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 ART2BP-201ENST00000453501 499 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.07□□□□□ -2.24
SHOX2O60902 RPL31P3-201ENST00000458430 332 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RNA5SP269-201ENST00000459032 137 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 AL049829.1-201ENST00000465411 156 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RBBP4P6-201ENST00000508098 202 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RNA5SP481-201ENST00000516814 122 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RNU6-685P-201ENST00000517088 95 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.07□□□□□ -2.24
SHOX2O60902 AC008752.3-201ENST00000588113 712 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 AL355802.3-201ENST00000607571 545 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 AP000720.1-201ENST00000625091 483 ntBASIC1.07□□□□□ -2.24
SHOX2O60902 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
SHOX2O60902 AC245060.5-201ENST00000610778 3293 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 RNU6-179P-201ENST00000363350 107 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 RNU6-501P-201ENST00000364072 100 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 RNU6-438P-201ENST00000365561 103 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 RNU6-1200P-201ENST00000384162 107 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 SNORA12-201ENST00000391162 147 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 MTCYBP2-201ENST00000407745 171 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AL135790.2-201ENST00000437701 267 ntBASIC1.06□□□□□ -2.24
SHOX2O60902 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.06□□□□□ -2.24
SHOX2O60902 HSPE1P9-201ENST00000440046 311 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms