Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AL670379.2-201ENST00000604983 252 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC005520.5-201ENST00000613926 164 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 AC241585.2-209ENST00000638217 143 ntBASIC3.53□□□□□ -1.84
TRIM13O60858 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM13O60858 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM13O60858 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM13O60858 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM13O60858 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM13O60858 RNU6-137P-201ENST00000363680 108 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 Y_RNA.563-201ENST00000384707 108 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 MIR493-201ENST00000385254 89 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 CRYBB2P1-203ENST00000415709 538 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AL078601.1-201ENST00000444542 271 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM13O60858 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 snoU109.2-201ENST00000459316 135 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AC010401.1-201ENST00000463867 348 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 RPL30P5-201ENST00000494923 336 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM13O60858 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 HSPE1P5-201ENST00000561489 272 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 MIR4431-201ENST00000579990 94 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 MIR5187-201ENST00000583479 76 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 DNAJC19P2-201ENST00000593340 302 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 Y_RNA.802-201ENST00000614892 130 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AC048347.1-201ENST00000624621 427 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 SCARNA4-202ENST00000625402 129 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 AC110491.1-201ENST00000562191 2010 ntBASIC3.52□□□□□ -1.85
TRIM13O60858 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TRIM13O60858 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM13O60858 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM13O60858 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM13O60858 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
TRIM13O60858 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM13O60858 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TRIM13O60858 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM13O60858 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 RNU6-899P-201ENST00000363947 107 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM13O60858 Y_RNA.420-201ENST00000384043 110 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 SNORA29-201ENST00000384183 140 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RNU6-72P-201ENST00000384285 79 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 Y_RNA.542-201ENST00000384641 111 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 RNU2-37P-201ENST00000410695 177 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RNU2-68P-201ENST00000410878 191 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AL117339.2-201ENST00000430475 180 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RPL23AP58-201ENST00000440453 469 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM13O60858 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RPL23AP14-201ENST00000468281 468 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AC139453.3-201ENST00000493276 369 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AC091874.1-201ENST00000511402 339 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 Y_RNA.797-201ENST00000515977 94 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RNU6-659P-201ENST00000516454 104 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 RNU6-572P-201ENST00000516724 80 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 IGKV2D-19-201ENST00000523346 262 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.51□□□□□ -1.85
TRIM13O60858 AC100767.1-201ENST00000528178 123 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 ZNF192P1-203ENST00000565888 810 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 MIR6820-201ENST00000611508 62 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AL357075.2-201ENST00000614906 189 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 AC027309.3-201ENST00000623419 351 ntBASIC3.51□□□□□ -1.85
TRIM13O60858 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM13O60858 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM13O60858 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM13O60858 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.51□□□□□ -1.85
TRIM13O60858 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM13O60858 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM13O60858 AP002088.1-201ENST00000382740 395 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 RNU6-429P-201ENST00000384582 108 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TRIM13O60858 RNU6-381P-201ENST00000391259 108 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 PTMAP5-201ENST00000393073 333 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM13O60858 AL139247.1-201ENST00000422768 325 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 NDUFB4P6-201ENST00000436819 366 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM13O60858 AC110768.1-201ENST00000509222 400 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 RNU6-58P-201ENST00000517143 103 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM13O60858 AC136601.2-201ENST00000604356 474 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 MIR8058-201ENST00000615737 89 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 AC092628.2-201ENST00000622492 339 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
TRIM13O60858 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms