Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RPS12P18-201ENST00000442381 270 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.44□□□□□ -1.7
GFRA3O60609 AC023449.1-201ENST00000454464 154 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 AC096725.1-201ENST00000514266 313 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 RNA5SP230-201ENST00000517039 122 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 RNU6-709P-201ENST00000517257 104 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 AC093249.4-201ENST00000564755 259 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 TCL6_2.1-201ENST00000615162 119 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.44□□□□□ -1.7
GFRA3O60609 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
GFRA3O60609 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
GFRA3O60609 AL592437.2-201ENST00000421655 2434 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA3O60609 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA3O60609 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA3O60609 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
GFRA3O60609 AC092376.2-201ENST00000622621 4116 ntBASIC4.44□□□□□ -1.7
GFRA3O60609 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.43□□□□□ -1.7
GFRA3O60609 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GFRA3O60609 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
GFRA3O60609 Y_RNA.96-201ENST00000363092 109 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 Y_RNA.360-201ENST00000365512 102 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 SNORD77.3-201ENST00000391113 65 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 AC245291.1-201ENST00000419501 328 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 AC027124.2-201ENST00000428249 105 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 RPL27AP5-201ENST00000469428 449 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 NDUFA4P2-201ENST00000489989 244 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 OR9P1P-201ENST00000496431 281 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 Y_RNA.666-201ENST00000516187 112 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 Y_RNA.705-201ENST00000516862 110 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 MIR4660-201ENST00000583549 74 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 AC073413.2-201ENST00000604332 360 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GFRA3O60609 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.43□□□□□ -1.7
GFRA3O60609 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 AC010329.2-201ENST00000595195 2737 ntBASIC4.43□□□□□ -1.7
GFRA3O60609 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA3O60609 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA3O60609 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA3O60609 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA3O60609 AL136164.3-201ENST00000624429 3978 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
GFRA3O60609 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA3O60609 MIR331-201ENST00000362302 94 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 RNU6-349P-201ENST00000362402 107 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA3O60609 REREP1Y-201ENST00000422655 198 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 AC079780.1-201ENST00000428259 207 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.42□□□□□ -1.7
GFRA3O60609 RN7SL290P-201ENST00000578661 300 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 AC136601.2-201ENST00000604356 474 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 AC021443.1-201ENST00000604478 211 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 AC005562.2-201ENST00000618264 111 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 SNORD98-201ENST00000636377 67 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 MIR376A2-201ENST00000636782 80 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA3O60609 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
GFRA3O60609 AC104260.2-201ENST00000623551 3497 ntBASIC4.42□□□□□ -1.7
GFRA3O60609 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA3O60609 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
GFRA3O60609 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA3O60609 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.41□□□□□ -1.7
GFRA3O60609 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GFRA3O60609 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
GFRA3O60609 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GFRA3O60609 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
GFRA3O60609 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 DEFB108F-201ENST00000344638 222 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 RNU6-529P-201ENST00000363383 104 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 Y_RNA.796-201ENST00000364268 102 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 Y_RNA.799-201ENST00000364992 102 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 RNU6-690P-201ENST00000365242 106 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 RPL7AP49-201ENST00000429522 581 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 AL591438.1-201ENST00000433508 581 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 RN7SL807P-201ENST00000470923 297 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 SRIP1-201ENST00000489235 288 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 AC108022.1-201ENST00000493466 478 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA3O60609 AC026403.1-201ENST00000518938 295 ntBASIC4.41□□□□□ -1.7
GFRA3O60609 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA3O60609 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.41□□□□□ -1.7
GFRA3O60609 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA3O60609 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
GFRA3O60609 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.41□□□□□ -1.7
GFRA3O60609 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms