Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SNORA36A-201ENST00000384221 132 ntBASIC2.3□□□□□ -2.04
SSX4O60224 RNU6-306P-201ENST00000384617 107 ntBASIC2.3□□□□□ -2.04
SSX4O60224 SNORA26.3-201ENST00000391119 136 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AL591034.2-201ENST00000402839 359 ntBASIC2.3□□□□□ -2.04
SSX4O60224 PDCL2P1-201ENST00000419302 352 ntBASIC2.3□□□□□ -2.04
SSX4O60224 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX4O60224 AC112220.1-201ENST00000434628 355 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AC098614.3-201ENST00000438957 440 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX4O60224 MTND5P5-201ENST00000503764 376 ntBASIC2.3□□□□□ -2.04
SSX4O60224 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.3□□□□□ -2.04
SSX4O60224 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX4O60224 AC005668.1-201ENST00000571142 476 ntBASIC2.3□□□□□ -2.04
SSX4O60224 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX4O60224 AC104984.5-201ENST00000586878 94 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AL078605.1-201ENST00000603529 500 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AC124303.1-201ENST00000605703 360 ntBASIC2.3□□□□□ -2.04
SSX4O60224 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
SSX4O60224 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSX4O60224 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSX4O60224 RNU4-15P-201ENST00000362613 141 ntBASIC2.29□□□□□ -2.04
SSX4O60224 Y_RNA.166-201ENST00000363730 102 ntBASIC2.29□□□□□ -2.04
SSX4O60224 Y_RNA.184-201ENST00000363884 108 ntBASIC2.29□□□□□ -2.04
SSX4O60224 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
SSX4O60224 MIR548F5-201ENST00000408421 86 ntBASIC2.29□□□□□ -2.04
SSX4O60224 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
SSX4O60224 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.29□□□□□ -2.04
SSX4O60224 DAP3P1-201ENST00000441522 278 ntBASIC2.29□□□□□ -2.04
SSX4O60224 AL353572.1-201ENST00000442490 417 ntBASIC2.29□□□□□ -2.04
SSX4O60224 AL513328.1-201ENST00000446460 224 ntBASIC2.29□□□□□ -2.04
SSX4O60224 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SSX4O60224 MTND3P10-201ENST00000450967 341 ntBASIC2.29□□□□□ -2.04
SSX4O60224 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.29□□□□□ -2.04
SSX4O60224 RNA5SP148-201ENST00000516527 94 ntBASIC2.29□□□□□ -2.04
SSX4O60224 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
SSX4O60224 POLR3GP2-201ENST00000588366 668 ntBASIC2.29□□□□□ -2.04
SSX4O60224 MIR6128-201ENST00000615528 109 ntBASIC2.29□□□□□ -2.04
SSX4O60224 AC063943.3-201ENST00000615562 356 ntBASIC2.29□□□□□ -2.04
SSX4O60224 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.29□□□□□ -2.04
SSX4O60224 AC243829.7-201ENST00000633081 225 ntBASIC2.29□□□□□ -2.04
SSX4O60224 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSX4O60224 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
SSX4O60224 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.28□□□□□ -2.04
SSX4O60224 Y_RNA.88-201ENST00000363029 99 ntBASIC2.28□□□□□ -2.04
SSX4O60224 RNU1-23P-201ENST00000363361 144 ntBASIC2.28□□□□□ -2.04
SSX4O60224 SNORA72.1-201ENST00000363485 129 ntBASIC2.28□□□□□ -2.04
SSX4O60224 RNU6-944P-201ENST00000364023 107 ntBASIC2.28□□□□□ -2.04
SSX4O60224 RNU4-56P-201ENST00000364700 142 ntBASIC2.28□□□□□ -2.04
SSX4O60224 SNORD81.2-201ENST00000365153 76 ntBASIC2.28□□□□□ -2.04
SSX4O60224 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
SSX4O60224 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
SSX4O60224 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SSX4O60224 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SSX4O60224 MIR548K-201ENST00000408406 116 ntBASIC2.28□□□□□ -2.04
SSX4O60224 EIF1AXP1-201ENST00000419267 435 ntBASIC2.28□□□□□ -2.04
SSX4O60224 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.28□□□□□ -2.04
SSX4O60224 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
SSX4O60224 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.28□□□□□ -2.04
SSX4O60224 HMGB1P18-201ENST00000438801 619 ntBASIC2.28□□□□□ -2.04
SSX4O60224 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.28□□□□□ -2.04
SSX4O60224 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.28□□□□□ -2.04
SSX4O60224 AC103851.1-201ENST00000506833 274 ntBASIC2.28□□□□□ -2.04
SSX4O60224 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
SSX4O60224 RNU1-54P-201ENST00000517181 120 ntBASIC2.28□□□□□ -2.04
SSX4O60224 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.28□□□□□ -2.04
SSX4O60224 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.28□□□□□ -2.04
SSX4O60224 AC091544.4-201ENST00000555268 342 ntBASIC2.28□□□□□ -2.04
SSX4O60224 AC021231.3-201ENST00000558497 370 ntBASIC2.28□□□□□ -2.04
SSX4O60224 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
SSX4O60224 MYL12BP1-201ENST00000569826 507 ntBASIC2.28□□□□□ -2.04
SSX4O60224 AC005730.3-201ENST00000583067 366 ntBASIC2.28□□□□□ -2.04
SSX4O60224 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
SSX4O60224 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.28□□□□□ -2.04
SSX4O60224 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.28□□□□□ -2.04
SSX4O60224 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.28□□□□□ -2.04
SSX4O60224 MIR6715A-201ENST00000615929 79 ntBASIC2.28□□□□□ -2.04
SSX4O60224 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSX4O60224 AC069528.2-201ENST00000624849 1991 ntBASIC2.28□□□□□ -2.04
SSX4O60224 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SSX4O60224 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSX4O60224 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SSX4O60224 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSX4O60224 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.27□□□□□ -2.05
SSX4O60224 RNU6-784P-201ENST00000384330 106 ntBASIC2.27□□□□□ -2.05
SSX4O60224 Y_RNA.597-201ENST00000410463 100 ntBASIC2.27□□□□□ -2.05
SSX4O60224 AC074085.1-201ENST00000413598 418 ntBASIC2.27□□□□□ -2.05
SSX4O60224 RPS3AP52-201ENST00000435639 297 ntBASIC2.27□□□□□ -2.05
SSX4O60224 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.27□□□□□ -2.05
SSX4O60224 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.27□□□□□ -2.05
SSX4O60224 AC145146.1-201ENST00000496370 254 ntBASIC2.27□□□□□ -2.05
SSX4O60224 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.27□□□□□ -2.05
SSX4O60224 RN7SKP24-201ENST00000515888 284 ntBASIC2.27□□□□□ -2.05
SSX4O60224 ACA59.1-201ENST00000515966 143 ntBASIC2.27□□□□□ -2.05
SSX4O60224 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.27□□□□□ -2.05
SSX4O60224 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms