Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
CREB3O43889 RNA5SP212-201ENST00000391223 107 ntBASIC2.56□□□□□ -2
CREB3O43889 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.56□□□□□ -2
CREB3O43889 AC244636.1-201ENST00000421152 228 ntBASIC2.56□□□□□ -2
CREB3O43889 AL035666.1-201ENST00000446195 348 ntBASIC2.56□□□□□ -2
CREB3O43889 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.56□□□□□ -2
CREB3O43889 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.56□□□□□ -2
CREB3O43889 AC083904.1-201ENST00000487828 231 ntBASIC2.56□□□□□ -2
CREB3O43889 RNU5F-4P-201ENST00000516581 114 ntBASIC2.56□□□□□ -2
CREB3O43889 AC026371.1-201ENST00000551867 419 ntBASIC2.56□□□□□ -2
CREB3O43889 ZNF519P2-201ENST00000557032 169 ntBASIC2.56□□□□□ -2
CREB3O43889 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
CREB3O43889 AC009994.1-201ENST00000606889 253 ntBASIC2.56□□□□□ -2
CREB3O43889 AL773524.1-201ENST00000614065 229 ntBASIC2.56□□□□□ -2
CREB3O43889 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
CREB3O43889 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
CREB3O43889 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CREB3O43889 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
CREB3O43889 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CREB3O43889 SNORA36A-201ENST00000384221 132 ntBASIC2.55□□□□□ -2
CREB3O43889 RNU6-378P-201ENST00000384324 107 ntBASIC2.55□□□□□ -2
CREB3O43889 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CREB3O43889 AL356432.1-201ENST00000405809 419 ntBASIC2.55□□□□□ -2
CREB3O43889 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
CREB3O43889 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.55□□□□□ -2
CREB3O43889 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.55□□□□□ -2
CREB3O43889 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
CREB3O43889 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
CREB3O43889 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.55□□□□□ -2
CREB3O43889 AK6P1-201ENST00000540219 478 ntBASIC2.55□□□□□ -2
CREB3O43889 AC090517.1-201ENST00000569307 266 ntBASIC2.55□□□□□ -2
CREB3O43889 AL096840.1-201ENST00000603287 93 ntBASIC2.55□□□□□ -2
CREB3O43889 RMST_6.1-201ENST00000611980 203 ntBASIC2.55□□□□□ -2
CREB3O43889 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.55□□□□□ -2
CREB3O43889 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CREB3O43889 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CREB3O43889 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CREB3O43889 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CREB3O43889 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CREB3O43889 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CREB3O43889 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CREB3O43889 RNU6-1026P-201ENST00000384465 108 ntBASIC2.54□□□□□ -2
CREB3O43889 SNORA8-201ENST00000384574 139 ntBASIC2.54□□□□□ -2
CREB3O43889 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
CREB3O43889 MIR597-201ENST00000384968 97 ntBASIC2.54□□□□□ -2
CREB3O43889 SNRPEP10-201ENST00000420249 274 ntBASIC2.54□□□□□ -2
CREB3O43889 AC123900.1-201ENST00000420390 96 ntBASIC2.54□□□□□ -2
CREB3O43889 EIF4EP2-201ENST00000422816 654 ntBASIC2.54□□□□□ -2
CREB3O43889 MTCO1P20-201ENST00000425366 358 ntBASIC2.54□□□□□ -2
CREB3O43889 AMD1P1-201ENST00000457220 922 ntBASIC2.54□□□□□ -2
CREB3O43889 AC007547.1-201ENST00000462177 490 ntBASIC2.54□□□□□ -2
CREB3O43889 AC092436.3-201ENST00000511788 257 ntBASIC2.54□□□□□ -2
CREB3O43889 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.54□□□□□ -2
CREB3O43889 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.54□□□□□ -2
CREB3O43889 AC104984.5-201ENST00000586878 94 ntBASIC2.54□□□□□ -2
CREB3O43889 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
CREB3O43889 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CREB3O43889 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
CREB3O43889 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CREB3O43889 Y_RNA.9-201ENST00000362354 101 ntBASIC2.53□□□□□ -2
CREB3O43889 U3.12-201ENST00000364498 214 ntBASIC2.53□□□□□ -2
CREB3O43889 Y_RNA.402-201ENST00000383972 102 ntBASIC2.53□□□□□ -2
CREB3O43889 Y_RNA.530-201ENST00000384587 101 ntBASIC2.53□□□□□ -2
CREB3O43889 RNU6-325P-201ENST00000411132 105 ntBASIC2.53□□□□□ -2
CREB3O43889 AL030996.1-201ENST00000411430 235 ntBASIC2.53□□□□□ -2
CREB3O43889 SRIP2-201ENST00000428470 166 ntBASIC2.53□□□□□ -2
CREB3O43889 RNU1-131P-201ENST00000458943 161 ntBASIC2.53□□□□□ -2
CREB3O43889 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
CREB3O43889 AP005639.2-201ENST00000527592 928 ntBASIC2.53□□□□□ -2
CREB3O43889 MIR8076-201ENST00000611401 83 ntBASIC2.53□□□□□ -2
CREB3O43889 FAM157A-202ENST00000615155 405 ntBASIC2.53□□□□□ -2
CREB3O43889 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.53□□□□□ -2
CREB3O43889 AL359697.1-201ENST00000624879 587 ntBASIC2.53□□□□□ -2
CREB3O43889 AC005336.3-201ENST00000623833 2679 ntBASIC2.52□□□□□ -2.01
CREB3O43889 CBX3P1-201ENST00000325243 554 ntBASIC2.52□□□□□ -2.01
CREB3O43889 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CREB3O43889 Y_RNA.41-201ENST00000362646 102 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU6-451P-201ENST00000362921 107 ntBASIC2.52□□□□□ -2.01
CREB3O43889 Y_RNA.100-201ENST00000363141 102 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU4-40P-201ENST00000364351 143 ntBASIC2.52□□□□□ -2.01
CREB3O43889 Y_RNA.373-201ENST00000365600 103 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU6-1286P-201ENST00000383871 107 ntBASIC2.52□□□□□ -2.01
CREB3O43889 SNORA32.2-201ENST00000384049 122 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU6-1093P-201ENST00000391194 107 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU2-41P-201ENST00000410991 178 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RNU6-373P-201ENST00000411247 98 ntBASIC2.52□□□□□ -2.01
CREB3O43889 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.52□□□□□ -2.01
CREB3O43889 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CREB3O43889 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
CREB3O43889 RPS23P5-201ENST00000495419 428 ntBASIC2.52□□□□□ -2.01
CREB3O43889 Y_RNA.665-201ENST00000516177 98 ntBASIC2.52□□□□□ -2.01
CREB3O43889 AC087441.2-201ENST00000529141 262 ntBASIC2.52□□□□□ -2.01
CREB3O43889 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CREB3O43889 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.52□□□□□ -2.01
CREB3O43889 AC008749.1-201ENST00000597650 306 ntBASIC2.52□□□□□ -2.01
CREB3O43889 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.52□□□□□ -2.01
CREB3O43889 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.52□□□□□ -2.01
CREB3O43889 MIR6715A-201ENST00000615929 79 ntBASIC2.52□□□□□ -2.01
CREB3O43889 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms