Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATP9BO43861 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATP9BO43861 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATP9BO43861 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 AL359854.1-201ENST00000614203 1594 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AC007256.1-201ENST00000392253 2765 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ATP9BO43861 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATP9BO43861 SNORD115-30-201ENST00000364117 82 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 SNORD50.2-201ENST00000365465 70 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RNU1-13P-201ENST00000384499 162 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RNA5SP354-201ENST00000391247 136 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RNU2-2P-201ENST00000410396 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.28□□□□□ -1.72
ATP9BO43861 Z98742.2-201ENST00000431564 187 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AL162151.2-201ENST00000448875 158 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RPS20P10-201ENST00000451209 253 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RPL23AP62-201ENST00000463396 453 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 SRIP1-201ENST00000489235 288 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AC136628.3-201ENST00000521868 290 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.28□□□□□ -1.72
ATP9BO43861 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.28□□□□□ -1.72
ATP9BO43861 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.28□□□□□ -1.72
ATP9BO43861 RNU2-4P-201ENST00000606190 192 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 U2.15-201ENST00000611544 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.16-201ENST00000613119 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.12-201ENST00000613778 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.9-201ENST00000615427 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.11-201ENST00000616345 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.2-201ENST00000616535 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.3-201ENST00000617785 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.19-201ENST00000618602 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 RNU2-1-201ENST00000618664 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.6-201ENST00000619225 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.5-201ENST00000619465 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 U2.10-201ENST00000620268 191 ntBASIC4.28□□□□□ -1.72
ATP9BO43861 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP9BO43861 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATP9BO43861 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATP9BO43861 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.27□□□□□ -1.73
ATP9BO43861 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
ATP9BO43861 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATP9BO43861 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 Y_RNA.121-201ENST00000363309 113 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 RNA5SP479-201ENST00000364858 117 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 U1.1-201ENST00000384101 164 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 SNORA12-201ENST00000391162 147 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 AL356095.1-201ENST00000417217 199 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 SUMO2P18-201ENST00000518873 252 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.27□□□□□ -1.73
ATP9BO43861 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.27□□□□□ -1.73
ATP9BO43861 AC008739.2-201ENST00000597006 317 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 AC084757.4-201ENST00000616350 526 ntBASIC4.27□□□□□ -1.73
ATP9BO43861 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.27□□□□□ -1.73
ATP9BO43861 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.27□□□□□ -1.73
ATP9BO43861 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATP9BO43861 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATP9BO43861 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.26□□□□□ -1.73
ATP9BO43861 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATP9BO43861 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATP9BO43861 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 RNA5SP388-201ENST00000362584 119 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 Y_RNA.243-201ENST00000364481 109 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 RNU6-312P-201ENST00000364629 107 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 Y_RNA.272-201ENST00000364696 102 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 RNU1-89P-201ENST00000384592 164 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 U3.39-201ENST00000408569 239 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 MIR1179-201ENST00000408703 91 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 AL451074.5-201ENST00000415894 435 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 RPL23AP46-201ENST00000438548 490 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 HMGN2P7-201ENST00000456186 273 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 U8.19-201ENST00000459095 133 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.26□□□□□ -1.73
ATP9BO43861 AC022655.2-201ENST00000577280 318 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 AC012531.5-201ENST00000611375 151 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 AC008873.1-201ENST00000625051 138 ntBASIC4.26□□□□□ -1.73
ATP9BO43861 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.26□□□□□ -1.73
ATP9BO43861 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATP9BO43861 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.26□□□□□ -1.73
ATP9BO43861 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.25□□□□□ -1.73
ATP9BO43861 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
ATP9BO43861 Y_RNA.182-201ENST00000363880 111 ntBASIC4.25□□□□□ -1.73
ATP9BO43861 Y_RNA.287-201ENST00000364853 94 ntBASIC4.25□□□□□ -1.73
ATP9BO43861 SNORD116-18-201ENST00000383961 92 ntBASIC4.25□□□□□ -1.73
ATP9BO43861 MIR29B2-201ENST00000385055 81 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms