Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.09□□□□□ -2.23
KDELR3O43731 AC023050.3-201ENST00000541142 333 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 HSPE1P4-201ENST00000550617 308 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 AC015688.6-201ENST00000577737 104 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 AC107304.1-201ENST00000604229 296 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 AL451064.1-201ENST00000607718 471 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 TUSC7.1-201ENST00000610969 165 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
KDELR3O43731 Y_RNA.4-201ENST00000362333 112 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-37P-201ENST00000362692 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-11P-201ENST00000364234 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-25P-201ENST00000383873 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-1-201ENST00000383898 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-48P-201ENST00000384161 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-36P-201ENST00000384172 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-4P-201ENST00000384205 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-5P-201ENST00000384238 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-3P-201ENST00000384314 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-16P-201ENST00000384385 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-15P-201ENST00000384534 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-2-201ENST00000384627 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-29P-201ENST00000384637 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-9-201ENST00000384776 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-33P-201ENST00000384793 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 MIR548B-201ENST00000385247 97 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNA5SP201-201ENST00000410316 124 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KDELR3O43731 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.08□□□□□ -2.24
KDELR3O43731 TOMM22P2-201ENST00000430735 237 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AC002486.1-201ENST00000435098 391 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AC099677.2-201ENST00000436385 175 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.08□□□□□ -2.24
KDELR3O43731 AL022238.1-201ENST00000442557 355 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.08□□□□□ -2.24
KDELR3O43731 GAPDHP17-201ENST00000449858 1001 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AC016925.1-201ENST00000458303 298 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU7-14P-201ENST00000459331 62 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 MTCO3P28-201ENST00000513351 515 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 SNORA31.16-201ENST00000516773 139 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 MTCO2P2-201ENST00000591258 225 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 Z99289.3-201ENST00000605586 594 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 RNU6-6P-201ENST00000606623 107 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 AC099654.5-201ENST00000636479 350 ntBASIC1.08□□□□□ -2.24
KDELR3O43731 MTND5P17-201ENST00000418405 1603 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
KDELR3O43731 RNU6-862P-201ENST00000362804 105 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 RNU1-96P-201ENST00000364163 162 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 SNORA63D-201ENST00000364359 132 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 RNU6-692P-201ENST00000384496 107 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 RNU6-1176P-201ENST00000390955 107 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 AC098592.1-201ENST00000419352 333 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 AC132479.1-201ENST00000449160 144 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 USP9YP12-201ENST00000450481 570 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 snoU13.27-201ENST00000459278 104 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.07□□□□□ -2.24
KDELR3O43731 AC016632.1-201ENST00000503994 196 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 EIF4A1P12-201ENST00000551910 141 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.07□□□□□ -2.24
KDELR3O43731 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.07□□□□□ -2.24
KDELR3O43731 AC112191.3-201ENST00000604371 277 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 AL121992.2-201ENST00000606262 256 ntBASIC1.07□□□□□ -2.24
KDELR3O43731 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
KDELR3O43731 RNU6-1287P-201ENST00000362914 107 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 Y_RNA.132-201ENST00000363421 102 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 RNU6-336P-201ENST00000364891 107 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 SNORD115-7-201ENST00000365306 82 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 RNU6-1060P-201ENST00000384664 107 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 HIGD1AP15-201ENST00000416198 280 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 MTCO2P23-201ENST00000425216 680 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 MTATP6P16-201ENST00000434543 526 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AL606662.1-201ENST00000445763 553 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 PGBD4P5-201ENST00000445958 426 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.06□□□□□ -2.24
KDELR3O43731 AC079140.5-201ENST00000507882 310 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.06□□□□□ -2.24
KDELR3O43731 ZNF321P-202ENST00000550843 495 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 CYP3A52P-201ENST00000563326 91 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.06□□□□□ -2.24
KDELR3O43731 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.06□□□□□ -2.24
KDELR3O43731 MIR3976-201ENST00000606807 139 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 AC095038.3-201ENST00000634439 195 ntBASIC1.06□□□□□ -2.24
KDELR3O43731 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KDELR3O43731 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
KDELR3O43731 SNORA26.3-201ENST00000391119 136 ntBASIC1.05□□□□□ -2.24
KDELR3O43731 COX6CP10-201ENST00000416832 224 ntBASIC1.05□□□□□ -2.24
KDELR3O43731 AC106883.1-201ENST00000418805 562 ntBASIC1.05□□□□□ -2.24
KDELR3O43731 AL512286.1-201ENST00000439244 400 ntBASIC1.05□□□□□ -2.24
KDELR3O43731 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms