Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMAD6O43541 MIR412-201ENST00000362142 91 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 SNORD14B-201ENST00000364533 90 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 Y_RNA.350-201ENST00000365409 98 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 Y_RNA.552-201ENST00000384665 112 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 RNU2-38P-201ENST00000410856 79 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 Z85995.1-201ENST00000415547 335 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AC092423.1-201ENST00000430165 186 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.82□□□□□ -1.96
SMAD6O43541 FABP5P15-201ENST00000453566 214 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.82□□□□□ -1.96
SMAD6O43541 AC133134.1-201ENST00000466800 359 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AC003982.1-202ENST00000469928 248 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 SCARNA15.2-201ENST00000516409 127 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 RNU6-1256P-201ENST00000516539 103 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.82□□□□□ -1.96
SMAD6O43541 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.82□□□□□ -1.96
SMAD6O43541 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.82□□□□□ -1.96
SMAD6O43541 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.82□□□□□ -1.96
SMAD6O43541 MIR5701-3-201ENST00000578890 82 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 MIR5701-1-201ENST00000585138 82 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 MIR5701-2-201ENST00000615634 82 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.82□□□□□ -1.96
SMAD6O43541 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SMAD6O43541 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMAD6O43541 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMAD6O43541 AC009487.2-201ENST00000420969 6821 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 ZNF299P-201ENST00000406845 1804 ntBASIC2.82□□□□□ -1.96
SMAD6O43541 AC010680.1-201ENST00000590024 3590 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SMAD6O43541 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.81□□□□□ -1.96
SMAD6O43541 Y_RNA.19-201ENST00000362462 99 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SMAD6O43541 AL451074.5-201ENST00000415894 435 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.81□□□□□ -1.96
SMAD6O43541 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.81□□□□□ -1.96
SMAD6O43541 SNORA59A-201ENST00000459326 152 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 RPL23AP45-201ENST00000476406 468 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 MTND1P19-201ENST00000511780 315 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 RNU6-897P-201ENST00000517135 105 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 AC144568.1-201ENST00000520139 137 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 CASP1P1-201ENST00000526345 212 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.81□□□□□ -1.96
SMAD6O43541 AC103996.1-201ENST00000555468 102 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 MIR4319-201ENST00000577285 85 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 MIR3128-201ENST00000581957 66 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 ZNF861P-201ENST00000588126 639 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 AC004805.2-201ENST00000605382 482 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 MIR6852-201ENST00000621699 66 ntBASIC2.81□□□□□ -1.96
SMAD6O43541 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.81□□□□□ -1.96
SMAD6O43541 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SMAD6O43541 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMAD6O43541 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SMAD6O43541 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
SMAD6O43541 MTND5P9-201ENST00000503854 1755 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 Y_RNA.60-201ENST00000362831 98 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 RNU6-770P-201ENST00000363929 105 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 RNU6-595P-201ENST00000363944 107 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 RNU4-50P-201ENST00000364361 141 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 Y_RNA.477-201ENST00000384352 108 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 Y_RNA.526-201ENST00000384572 110 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SMAD6O43541 AL117339.3-201ENST00000418733 162 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
SMAD6O43541 HIGD1AP2-201ENST00000446367 280 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 FCF1P4-201ENST00000448326 183 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.8□□□□□ -1.96
SMAD6O43541 RPS20P22-201ENST00000473700 357 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.8□□□□□ -1.96
SMAD6O43541 SNORA40.15-201ENST00000516884 107 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AC109329.1-201ENST00000518744 317 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.8□□□□□ -1.96
SMAD6O43541 MIR5696-201ENST00000578474 85 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AC103810.1-201ENST00000579873 453 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 AL159153.1-201ENST00000619688 317 ntBASIC2.8□□□□□ -1.96
SMAD6O43541 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.8□□□□□ -1.96
SMAD6O43541 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
SMAD6O43541 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SMAD6O43541 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMAD6O43541 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SMAD6O43541 OR56A5-201ENST00000340110 738 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 Y_RNA.14-201ENST00000362415 103 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 Y_RNA.245-201ENST00000364493 95 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SMAD6O43541 RNU6-708P-201ENST00000384217 107 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MIR10A-201ENST00000385043 110 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MIR628-201ENST00000385229 95 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MIR181B1-201ENST00000385240 110 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MIR767-201ENST00000390228 109 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.79□□□□□ -1.96
SMAD6O43541 RNU2-52P-201ENST00000410680 190 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 Y_RNA.623-201ENST00000411128 95 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC007098.1-201ENST00000420122 367 ntBASIC2.79□□□□□ -1.96
SMAD6O43541 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms